Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Upk1aQ9D132 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.19■□□□□ 0.5
Upk1aQ9D132 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upk1aQ9D132 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.19■□□□□ 0.5
Upk1aQ9D132 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.18■□□□□ 0.5
Upk1aQ9D132 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1aQ9D132 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1aQ9D132 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1aQ9D132 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1aQ9D132 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Upk1aQ9D132 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1aQ9D132 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1aQ9D132 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1aQ9D132 Gm9959-201ENSMUST00000068277 390 ntBASIC18.18■□□□□ 0.5
Upk1aQ9D132 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1aQ9D132 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk1aQ9D132 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Upk1aQ9D132 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk1aQ9D132 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk1aQ9D132 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk1aQ9D132 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk1aQ9D132 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk1aQ9D132 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.17■□□□□ 0.5
Upk1aQ9D132 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.17■□□□□ 0.5
Upk1aQ9D132 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.17■□□□□ 0.5
Upk1aQ9D132 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.17■□□□□ 0.5
Upk1aQ9D132 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Upk1aQ9D132 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Upk1aQ9D132 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Upk1aQ9D132 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
Upk1aQ9D132 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.16■□□□□ 0.5
Upk1aQ9D132 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk1aQ9D132 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1aQ9D132 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1aQ9D132 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Upk1aQ9D132 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1aQ9D132 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1aQ9D132 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1aQ9D132 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1aQ9D132 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk1aQ9D132 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Upk1aQ9D132 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.14■□□□□ 0.5
Upk1aQ9D132 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upk1aQ9D132 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upk1aQ9D132 Gm22238-201ENSMUST00000175222 88 ntBASIC18.14■□□□□ 0.49
Upk1aQ9D132 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.14■□□□□ 0.49
Upk1aQ9D132 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.14■□□□□ 0.49
Upk1aQ9D132 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upk1aQ9D132 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1aQ9D132 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1aQ9D132 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Upk1aQ9D132 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.13■□□□□ 0.49
Upk1aQ9D132 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Upk1aQ9D132 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1aQ9D132 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1aQ9D132 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1aQ9D132 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Upk1aQ9D132 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Upk1aQ9D132 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1aQ9D132 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1aQ9D132 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.12■□□□□ 0.49
Upk1aQ9D132 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.12■□□□□ 0.49
Upk1aQ9D132 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1aQ9D132 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1aQ9D132 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1aQ9D132 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1aQ9D132 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1aQ9D132 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1aQ9D132 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Upk1aQ9D132 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1aQ9D132 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1aQ9D132 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1aQ9D132 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1aQ9D132 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.11■□□□□ 0.49
Upk1aQ9D132 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.11■□□□□ 0.49
Upk1aQ9D132 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1aQ9D132 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Upk1aQ9D132 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Upk1aQ9D132 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Upk1aQ9D132 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.1■□□□□ 0.49
Upk1aQ9D132 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upk1aQ9D132 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upk1aQ9D132 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Upk1aQ9D132 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Upk1aQ9D132 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms