Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chaf1bQ9D0N7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chaf1bQ9D0N7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chaf1bQ9D0N7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Chaf1bQ9D0N7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chaf1bQ9D0N7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chaf1bQ9D0N7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chaf1bQ9D0N7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.96■□□□□ 0.47
Chaf1bQ9D0N7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chaf1bQ9D0N7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
Chaf1bQ9D0N7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chaf1bQ9D0N7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chaf1bQ9D0N7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Chaf1bQ9D0N7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Chaf1bQ9D0N7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 AA386476-201ENSMUST00000098781 1665 ntBASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chaf1bQ9D0N7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Chaf1bQ9D0N7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Chaf1bQ9D0N7 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Chaf1bQ9D0N7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1bQ9D0N7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1bQ9D0N7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1bQ9D0N7 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.91■□□□□ 0.46
Chaf1bQ9D0N7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1bQ9D0N7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Chaf1bQ9D0N7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.91■□□□□ 0.46
Chaf1bQ9D0N7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.91■□□□□ 0.46
Chaf1bQ9D0N7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1bQ9D0N7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Chaf1bQ9D0N7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Chaf1bQ9D0N7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Chaf1bQ9D0N7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms