Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Raet1eQ9CZQ6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raet1eQ9CZQ6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raet1eQ9CZQ6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raet1eQ9CZQ6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raet1eQ9CZQ6 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raet1eQ9CZQ6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Raet1eQ9CZQ6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Gm11175-201ENSMUST00000116172 543 ntBASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Raet1eQ9CZQ6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1eQ9CZQ6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1eQ9CZQ6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1eQ9CZQ6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1eQ9CZQ6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1eQ9CZQ6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1eQ9CZQ6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.81■□□□□ 0.28
Raet1eQ9CZQ6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Raet1eQ9CZQ6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Raet1eQ9CZQ6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Raet1eQ9CZQ6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.79■□□□□ 0.28
Raet1eQ9CZQ6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Raet1eQ9CZQ6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Raet1eQ9CZQ6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Raet1eQ9CZQ6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Raet1eQ9CZQ6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.77■□□□□ 0.28
Raet1eQ9CZQ6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.77■□□□□ 0.28
Raet1eQ9CZQ6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.77■□□□□ 0.28
Raet1eQ9CZQ6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Raet1eQ9CZQ6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Raet1eQ9CZQ6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Raet1eQ9CZQ6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Raet1eQ9CZQ6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Raet1eQ9CZQ6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Raet1eQ9CZQ6 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms