Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim13Q9CYB0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Trim13Q9CYB0 Gm9870-201ENSMUST00000063874 645 ntBASIC17.64■□□□□ 0.41
Trim13Q9CYB0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim13Q9CYB0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim13Q9CYB0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim13Q9CYB0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim13Q9CYB0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim13Q9CYB0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim13Q9CYB0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim13Q9CYB0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim13Q9CYB0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim13Q9CYB0 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.62■□□□□ 0.41
Trim13Q9CYB0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim13Q9CYB0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim13Q9CYB0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim13Q9CYB0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim13Q9CYB0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim13Q9CYB0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim13Q9CYB0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim13Q9CYB0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim13Q9CYB0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Trim13Q9CYB0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim13Q9CYB0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim13Q9CYB0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim13Q9CYB0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim13Q9CYB0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim13Q9CYB0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim13Q9CYB0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim13Q9CYB0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim13Q9CYB0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim13Q9CYB0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trim13Q9CYB0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.6■□□□□ 0.41
Trim13Q9CYB0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim13Q9CYB0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim13Q9CYB0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim13Q9CYB0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trim13Q9CYB0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trim13Q9CYB0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim13Q9CYB0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim13Q9CYB0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim13Q9CYB0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim13Q9CYB0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim13Q9CYB0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim13Q9CYB0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim13Q9CYB0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trim13Q9CYB0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trim13Q9CYB0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.58■□□□□ 0.41
Trim13Q9CYB0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trim13Q9CYB0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trim13Q9CYB0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms