Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Chd1lQ9CXF7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd1lQ9CXF7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd1lQ9CXF7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd1lQ9CXF7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd1lQ9CXF7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chd1lQ9CXF7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chd1lQ9CXF7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chd1lQ9CXF7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
Chd1lQ9CXF7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd1lQ9CXF7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd1lQ9CXF7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Chd1lQ9CXF7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Chd1lQ9CXF7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chd1lQ9CXF7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chd1lQ9CXF7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.61■■□□□ 1.05
Chd1lQ9CXF7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.61■■□□□ 1.05
Chd1lQ9CXF7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.61■■□□□ 1.05
Chd1lQ9CXF7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chd1lQ9CXF7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chd1lQ9CXF7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Chd1lQ9CXF7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd1lQ9CXF7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd1lQ9CXF7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chd1lQ9CXF7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Chd1lQ9CXF7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd1lQ9CXF7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Chd1lQ9CXF7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Chd1lQ9CXF7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd1lQ9CXF7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd1lQ9CXF7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.59■■□□□ 1.05
Chd1lQ9CXF7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd1lQ9CXF7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.59■■□□□ 1.05
Chd1lQ9CXF7 Gm9870-201ENSMUST00000063874 645 ntBASIC21.59■■□□□ 1.05
Chd1lQ9CXF7 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.59■■□□□ 1.05
Chd1lQ9CXF7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd1lQ9CXF7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Chd1lQ9CXF7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Chd1lQ9CXF7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Chd1lQ9CXF7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chd1lQ9CXF7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Chd1lQ9CXF7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chd1lQ9CXF7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Chd1lQ9CXF7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.58■■□□□ 1.05
Chd1lQ9CXF7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Chd1lQ9CXF7 Etf1-202ENSMUST00000180351 108 ntBASIC21.58■■□□□ 1.05
Chd1lQ9CXF7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Chd1lQ9CXF7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chd1lQ9CXF7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chd1lQ9CXF7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Chd1lQ9CXF7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd1lQ9CXF7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd1lQ9CXF7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Chd1lQ9CXF7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Chd1lQ9CXF7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd1lQ9CXF7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Chd1lQ9CXF7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd1lQ9CXF7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Chd1lQ9CXF7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd1lQ9CXF7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.56■■□□□ 1.04
Chd1lQ9CXF7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd1lQ9CXF7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd1lQ9CXF7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd1lQ9CXF7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd1lQ9CXF7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd1lQ9CXF7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Chd1lQ9CXF7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Gm5921-201ENSMUST00000075898 882 ntBASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.55■■□□□ 1.04
Chd1lQ9CXF7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chd1lQ9CXF7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd1lQ9CXF7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd1lQ9CXF7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chd1lQ9CXF7 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.54■■□□□ 1.04
Chd1lQ9CXF7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms