Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.19■□□□□ 0.66
CNEP1R1Q8N9A8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNEP1R1Q8N9A8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CNEP1R1Q8N9A8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.19■□□□□ 0.66
CNEP1R1Q8N9A8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNEP1R1Q8N9A8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 AC079089.2-201ENST00000531211 1277 ntBASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNEP1R1Q8N9A8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CNEP1R1Q8N9A8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 AC079140.4-201ENST00000507448 529 ntBASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.16■□□□□ 0.66
CNEP1R1Q8N9A8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 AC004911.1-201ENST00000416316 871 ntBASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 AC009237.3-201ENST00000393279 1427 ntBASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNEP1R1Q8N9A8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CNEP1R1Q8N9A8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.14■□□□□ 0.66
CNEP1R1Q8N9A8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CNEP1R1Q8N9A8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
CNEP1R1Q8N9A8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 OR7E47P-201ENST00000546390 1422 ntBASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 AC004854.2-201ENST00000608450 1441 ntBASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 DUSP8P5-201ENST00000422884 1815 ntBASIC19.14■□□□□ 0.65
CNEP1R1Q8N9A8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CNEP1R1Q8N9A8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNEP1R1Q8N9A8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNEP1R1Q8N9A8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.13■□□□□ 0.65
CNEP1R1Q8N9A8 AC016769.1-201ENST00000409132 1010 ntBASIC19.13■□□□□ 0.65
CNEP1R1Q8N9A8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.13■□□□□ 0.65
CNEP1R1Q8N9A8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CNEP1R1Q8N9A8 AC137761.2-201ENST00000561729 223 ntBASIC19.13■□□□□ 0.65
CNEP1R1Q8N9A8 AC145350.3-201ENST00000569033 163 ntBASIC19.13■□□□□ 0.65
CNEP1R1Q8N9A8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNEP1R1Q8N9A8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms