Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CroccQ8CJ40 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.33■□□□□ 0.52
CroccQ8CJ40 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.33■□□□□ 0.52
CroccQ8CJ40 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.33■□□□□ 0.52
CroccQ8CJ40 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CroccQ8CJ40 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CroccQ8CJ40 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CroccQ8CJ40 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CroccQ8CJ40 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.33■□□□□ 0.52
CroccQ8CJ40 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CroccQ8CJ40 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CroccQ8CJ40 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CroccQ8CJ40 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CroccQ8CJ40 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CroccQ8CJ40 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CroccQ8CJ40 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.3■□□□□ 0.52
CroccQ8CJ40 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CroccQ8CJ40 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CroccQ8CJ40 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CroccQ8CJ40 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CroccQ8CJ40 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CroccQ8CJ40 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CroccQ8CJ40 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CroccQ8CJ40 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CroccQ8CJ40 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CroccQ8CJ40 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CroccQ8CJ40 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CroccQ8CJ40 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CroccQ8CJ40 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CroccQ8CJ40 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CroccQ8CJ40 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CroccQ8CJ40 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CroccQ8CJ40 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CroccQ8CJ40 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CroccQ8CJ40 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.29■□□□□ 0.52
CroccQ8CJ40 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.28■□□□□ 0.52
CroccQ8CJ40 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.28■□□□□ 0.52
CroccQ8CJ40 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CroccQ8CJ40 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CroccQ8CJ40 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CroccQ8CJ40 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.28■□□□□ 0.52
CroccQ8CJ40 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CroccQ8CJ40 Gm43060-201ENSMUST00000200621 289 ntBASIC18.28■□□□□ 0.52
CroccQ8CJ40 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.28■□□□□ 0.52
CroccQ8CJ40 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.28■□□□□ 0.52
CroccQ8CJ40 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CroccQ8CJ40 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CroccQ8CJ40 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CroccQ8CJ40 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.27■□□□□ 0.52
CroccQ8CJ40 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CroccQ8CJ40 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CroccQ8CJ40 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CroccQ8CJ40 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CroccQ8CJ40 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.27■□□□□ 0.51
CroccQ8CJ40 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms