Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim52Q8CDV4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim52Q8CDV4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Trim52Q8CDV4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim52Q8CDV4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
Trim52Q8CDV4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim52Q8CDV4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim52Q8CDV4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.83■■□□□ 1.41
Trim52Q8CDV4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Trim52Q8CDV4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Trim52Q8CDV4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC23.83■■□□□ 1.41
Trim52Q8CDV4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Trim52Q8CDV4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Trim52Q8CDV4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Trim52Q8CDV4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Trim52Q8CDV4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.82■■□□□ 1.4
Trim52Q8CDV4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim52Q8CDV4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC23.82■■□□□ 1.4
Trim52Q8CDV4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC23.82■■□□□ 1.4
Trim52Q8CDV4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Trim52Q8CDV4 Rab3c-203ENSMUST00000224180 967 ntBASIC23.82■■□□□ 1.4
Trim52Q8CDV4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim52Q8CDV4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim52Q8CDV4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Trim52Q8CDV4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim52Q8CDV4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim52Q8CDV4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim52Q8CDV4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Trim52Q8CDV4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Trim52Q8CDV4 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.81■■□□□ 1.4
Trim52Q8CDV4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC23.81■■□□□ 1.4
Trim52Q8CDV4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim52Q8CDV4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim52Q8CDV4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim52Q8CDV4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim52Q8CDV4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim52Q8CDV4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim52Q8CDV4 Gm45640-201ENSMUST00000210665 1896 ntBASIC23.8■■□□□ 1.4
Trim52Q8CDV4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.8■■□□□ 1.4
Trim52Q8CDV4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim52Q8CDV4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim52Q8CDV4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim52Q8CDV4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim52Q8CDV4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Trim52Q8CDV4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim52Q8CDV4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim52Q8CDV4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Trim52Q8CDV4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim52Q8CDV4 Gm13509-201ENSMUST00000119733 1308 ntBASIC23.79■■□□□ 1.4
Trim52Q8CDV4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim52Q8CDV4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim52Q8CDV4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim52Q8CDV4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim52Q8CDV4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.78■■□□□ 1.4
Trim52Q8CDV4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Trim52Q8CDV4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.78■■□□□ 1.4
Trim52Q8CDV4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.78■■□□□ 1.4
Trim52Q8CDV4 Gm37856-201ENSMUST00000191634 999 ntBASIC23.78■■□□□ 1.4
Trim52Q8CDV4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim52Q8CDV4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim52Q8CDV4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
Trim52Q8CDV4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim52Q8CDV4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim52Q8CDV4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim52Q8CDV4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim52Q8CDV4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim52Q8CDV4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim52Q8CDV4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Trim52Q8CDV4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC23.77■■□□□ 1.4
Trim52Q8CDV4 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.77■■□□□ 1.4
Trim52Q8CDV4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim52Q8CDV4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim52Q8CDV4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim52Q8CDV4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim52Q8CDV4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim52Q8CDV4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim52Q8CDV4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Trim52Q8CDV4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim52Q8CDV4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim52Q8CDV4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim52Q8CDV4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Trim52Q8CDV4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim52Q8CDV4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim52Q8CDV4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim52Q8CDV4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim52Q8CDV4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim52Q8CDV4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms