Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Shisa4Q8CA71 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Shisa4Q8CA71 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Shisa4Q8CA71 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Shisa4Q8CA71 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Shisa4Q8CA71 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shisa4Q8CA71 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Shisa4Q8CA71 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shisa4Q8CA71 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.41■■□□□ 1.18
Shisa4Q8CA71 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.41■■□□□ 1.18
Shisa4Q8CA71 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shisa4Q8CA71 Gm18688-201ENSMUST00000204695 1859 ntBASIC22.41■■□□□ 1.18
Shisa4Q8CA71 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shisa4Q8CA71 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Shisa4Q8CA71 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Shisa4Q8CA71 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.4■■□□□ 1.18
Shisa4Q8CA71 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Shisa4Q8CA71 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Shisa4Q8CA71 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Shisa4Q8CA71 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Shisa4Q8CA71 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Shisa4Q8CA71 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Shisa4Q8CA71 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Shisa4Q8CA71 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
Shisa4Q8CA71 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Shisa4Q8CA71 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Shisa4Q8CA71 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Shisa4Q8CA71 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Shisa4Q8CA71 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.39■■□□□ 1.17
Shisa4Q8CA71 AV356131-201ENSMUST00000206201 750 ntBASIC22.39■■□□□ 1.17
Shisa4Q8CA71 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Shisa4Q8CA71 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.39■■□□□ 1.17
Shisa4Q8CA71 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.39■■□□□ 1.17
Shisa4Q8CA71 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Shisa4Q8CA71 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.39■■□□□ 1.17
Shisa4Q8CA71 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Shisa4Q8CA71 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Shisa4Q8CA71 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Shisa4Q8CA71 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC22.38■■□□□ 1.17
Shisa4Q8CA71 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Shisa4Q8CA71 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Shisa4Q8CA71 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Shisa4Q8CA71 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Shisa4Q8CA71 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Shisa4Q8CA71 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Shisa4Q8CA71 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Shisa4Q8CA71 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Shisa4Q8CA71 Gm13534-201ENSMUST00000121169 513 ntBASIC22.37■■□□□ 1.17
Shisa4Q8CA71 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.37■■□□□ 1.17
Shisa4Q8CA71 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Shisa4Q8CA71 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Shisa4Q8CA71 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC22.37■■□□□ 1.17
Shisa4Q8CA71 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Shisa4Q8CA71 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Shisa4Q8CA71 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Shisa4Q8CA71 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shisa4Q8CA71 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shisa4Q8CA71 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shisa4Q8CA71 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shisa4Q8CA71 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shisa4Q8CA71 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shisa4Q8CA71 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Shisa4Q8CA71 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Shisa4Q8CA71 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Shisa4Q8CA71 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
Shisa4Q8CA71 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Shisa4Q8CA71 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Shisa4Q8CA71 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Shisa4Q8CA71 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Shisa4Q8CA71 Gm42778-201ENSMUST00000199644 553 ntBASIC22.35■■□□□ 1.17
Shisa4Q8CA71 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Shisa4Q8CA71 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Shisa4Q8CA71 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Shisa4Q8CA71 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Shisa4Q8CA71 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC22.34■■□□□ 1.17
Shisa4Q8CA71 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Shisa4Q8CA71 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Shisa4Q8CA71 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Shisa4Q8CA71 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Shisa4Q8CA71 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Shisa4Q8CA71 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Shisa4Q8CA71 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Shisa4Q8CA71 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Shisa4Q8CA71 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Shisa4Q8CA71 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.33■■□□□ 1.17
Shisa4Q8CA71 Gm18671-201ENSMUST00000214826 683 ntBASIC22.33■■□□□ 1.17
Shisa4Q8CA71 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Shisa4Q8CA71 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.33■■□□□ 1.16
Shisa4Q8CA71 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Shisa4Q8CA71 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Shisa4Q8CA71 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Shisa4Q8CA71 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Shisa4Q8CA71 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Shisa4Q8CA71 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Shisa4Q8CA71 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Shisa4Q8CA71 Iqck-206ENSMUST00000208658 2891 ntBASIC22.31■■□□□ 1.16
Shisa4Q8CA71 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Shisa4Q8CA71 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Shisa4Q8CA71 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Shisa4Q8CA71 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms