Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp43Q8BUM9 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.39■□□□□ 0.7
Usp43Q8BUM9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp43Q8BUM9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp43Q8BUM9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp43Q8BUM9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Usp43Q8BUM9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp43Q8BUM9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp43Q8BUM9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Usp43Q8BUM9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.39■□□□□ 0.69
Usp43Q8BUM9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp43Q8BUM9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp43Q8BUM9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp43Q8BUM9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp43Q8BUM9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Usp43Q8BUM9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Usp43Q8BUM9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp43Q8BUM9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp43Q8BUM9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp43Q8BUM9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.38■□□□□ 0.69
Usp43Q8BUM9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.38■□□□□ 0.69
Usp43Q8BUM9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp43Q8BUM9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp43Q8BUM9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp43Q8BUM9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp43Q8BUM9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp43Q8BUM9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp43Q8BUM9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp43Q8BUM9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp43Q8BUM9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp43Q8BUM9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp43Q8BUM9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Usp43Q8BUM9 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.37■□□□□ 0.69
Usp43Q8BUM9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.37■□□□□ 0.69
Usp43Q8BUM9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp43Q8BUM9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp43Q8BUM9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp43Q8BUM9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp43Q8BUM9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp43Q8BUM9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp43Q8BUM9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp43Q8BUM9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp43Q8BUM9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp43Q8BUM9 Gm7860-201ENSMUST00000121190 879 ntBASIC19.36■□□□□ 0.69
Usp43Q8BUM9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.36■□□□□ 0.69
Usp43Q8BUM9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp43Q8BUM9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp43Q8BUM9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Usp43Q8BUM9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.36■□□□□ 0.69
Usp43Q8BUM9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Usp43Q8BUM9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Usp43Q8BUM9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp43Q8BUM9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.35■□□□□ 0.69
Usp43Q8BUM9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp43Q8BUM9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp43Q8BUM9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Usp43Q8BUM9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp43Q8BUM9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp43Q8BUM9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp43Q8BUM9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp43Q8BUM9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Usp43Q8BUM9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp43Q8BUM9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Usp43Q8BUM9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp43Q8BUM9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp43Q8BUM9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.33■□□□□ 0.69
Usp43Q8BUM9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp43Q8BUM9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Usp43Q8BUM9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Usp43Q8BUM9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp43Q8BUM9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Usp43Q8BUM9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Usp43Q8BUM9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp43Q8BUM9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Usp43Q8BUM9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp43Q8BUM9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms