Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cnih3Q6ZWS4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cnih3Q6ZWS4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cnih3Q6ZWS4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cnih3Q6ZWS4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
Cnih3Q6ZWS4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Cnih3Q6ZWS4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Cap2-205ENSMUST00000225824 1634 ntBASIC17.58■□□□□ 0.4
Cnih3Q6ZWS4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Gm43530-201ENSMUST00000195920 274 ntBASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cnih3Q6ZWS4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cnih3Q6ZWS4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
Cnih3Q6ZWS4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnih3Q6ZWS4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.54■□□□□ 0.4
Cnih3Q6ZWS4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnih3Q6ZWS4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cnih3Q6ZWS4 Gm13238-201ENSMUST00000117655 780 ntBASIC17.54■□□□□ 0.4
Cnih3Q6ZWS4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms