Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx4Q61496 Gm715-201ENSMUST00000117865 831 ntBASIC21.13■□□□□ 0.97
Ddx4Q61496 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ddx4Q61496 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.13■□□□□ 0.97
Ddx4Q61496 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ddx4Q61496 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx4Q61496 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx4Q61496 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ddx4Q61496 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx4Q61496 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx4Q61496 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx4Q61496 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ddx4Q61496 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ddx4Q61496 Dio3-201ENSMUST00000097228 1449 ntBASIC21.12■□□□□ 0.97
Ddx4Q61496 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx4Q61496 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx4Q61496 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx4Q61496 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Ddx4Q61496 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ddx4Q61496 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx4Q61496 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.11■□□□□ 0.97
Ddx4Q61496 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.11■□□□□ 0.97
Ddx4Q61496 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx4Q61496 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx4Q61496 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.11■□□□□ 0.97
Ddx4Q61496 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ddx4Q61496 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx4Q61496 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx4Q61496 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx4Q61496 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx4Q61496 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.1■□□□□ 0.97
Ddx4Q61496 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.1■□□□□ 0.97
Ddx4Q61496 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.1■□□□□ 0.97
Ddx4Q61496 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx4Q61496 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.1■□□□□ 0.97
Ddx4Q61496 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Ddx4Q61496 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ddx4Q61496 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.1■□□□□ 0.97
Ddx4Q61496 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.09■□□□□ 0.97
Ddx4Q61496 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx4Q61496 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.09■□□□□ 0.97
Ddx4Q61496 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx4Q61496 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ddx4Q61496 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx4Q61496 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ddx4Q61496 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx4Q61496 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.08■□□□□ 0.97
Ddx4Q61496 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx4Q61496 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ddx4Q61496 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Ddx4Q61496 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx4Q61496 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx4Q61496 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ddx4Q61496 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx4Q61496 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx4Q61496 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx4Q61496 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx4Q61496 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.07■□□□□ 0.96
Ddx4Q61496 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.07■□□□□ 0.96
Ddx4Q61496 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.07■□□□□ 0.96
Ddx4Q61496 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.07■□□□□ 0.96
Ddx4Q61496 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx4Q61496 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx4Q61496 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx4Q61496 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ddx4Q61496 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx4Q61496 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx4Q61496 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ddx4Q61496 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.06■□□□□ 0.96
Ddx4Q61496 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.06■□□□□ 0.96
Ddx4Q61496 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ddx4Q61496 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.05■□□□□ 0.96
Ddx4Q61496 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx4Q61496 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx4Q61496 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx4Q61496 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx4Q61496 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx4Q61496 Gm15565-201ENSMUST00000118890 427 ntBASIC21.05■□□□□ 0.96
Ddx4Q61496 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx4Q61496 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx4Q61496 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.05■□□□□ 0.96
Ddx4Q61496 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx4Q61496 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx4Q61496 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ddx4Q61496 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ddx4Q61496 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ddx4Q61496 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Ddx4Q61496 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx4Q61496 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx4Q61496 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.04■□□□□ 0.96
Ddx4Q61496 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx4Q61496 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx4Q61496 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx4Q61496 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx4Q61496 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx4Q61496 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx4Q61496 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ddx4Q61496 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.04■□□□□ 0.96
Ddx4Q61496 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.04■□□□□ 0.96
Ddx4Q61496 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms