Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BC051142Q3V0M8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BC051142Q3V0M8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BC051142Q3V0M8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BC051142Q3V0M8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BC051142Q3V0M8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BC051142Q3V0M8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.4■□□□□ 0.86
BC051142Q3V0M8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
BC051142Q3V0M8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BC051142Q3V0M8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
BC051142Q3V0M8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BC051142Q3V0M8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
BC051142Q3V0M8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BC051142Q3V0M8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BC051142Q3V0M8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
BC051142Q3V0M8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BC051142Q3V0M8 Gm11421-201ENSMUST00000122124 294 ntBASIC20.39■□□□□ 0.85
BC051142Q3V0M8 Gm43017-201ENSMUST00000198296 752 ntBASIC20.39■□□□□ 0.85
BC051142Q3V0M8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BC051142Q3V0M8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BC051142Q3V0M8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BC051142Q3V0M8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BC051142Q3V0M8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BC051142Q3V0M8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BC051142Q3V0M8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BC051142Q3V0M8 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.39■□□□□ 0.85
BC051142Q3V0M8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BC051142Q3V0M8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BC051142Q3V0M8 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.38■□□□□ 0.85
BC051142Q3V0M8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BC051142Q3V0M8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BC051142Q3V0M8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BC051142Q3V0M8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
BC051142Q3V0M8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
BC051142Q3V0M8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
BC051142Q3V0M8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BC051142Q3V0M8 Gm40848-201ENSMUST00000221998 324 ntBASIC20.38■□□□□ 0.85
BC051142Q3V0M8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
BC051142Q3V0M8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
BC051142Q3V0M8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BC051142Q3V0M8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
BC051142Q3V0M8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.36■□□□□ 0.85
BC051142Q3V0M8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
BC051142Q3V0M8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BC051142Q3V0M8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
BC051142Q3V0M8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms