Protein–RNA interactions for Protein: Q3UHC2

Lrrk1, Leucine-rich repeat serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 2,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk1Q3UHC2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrk1Q3UHC2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrk1Q3UHC2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrk1Q3UHC2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrk1Q3UHC2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrk1Q3UHC2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrk1Q3UHC2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrk1Q3UHC2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Lrrk1Q3UHC2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.8■□□□□ 0.44
Lrrk1Q3UHC2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrk1Q3UHC2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.8■□□□□ 0.44
Lrrk1Q3UHC2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrk1Q3UHC2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Lrrk1Q3UHC2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrk1Q3UHC2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrk1Q3UHC2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrk1Q3UHC2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.79■□□□□ 0.44
Lrrk1Q3UHC2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.79■□□□□ 0.44
Lrrk1Q3UHC2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Lrrk1Q3UHC2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lrrk1Q3UHC2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.78■□□□□ 0.44
Lrrk1Q3UHC2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Lrrk1Q3UHC2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.78■□□□□ 0.44
Lrrk1Q3UHC2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.78■□□□□ 0.44
Lrrk1Q3UHC2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.78■□□□□ 0.44
Lrrk1Q3UHC2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrk1Q3UHC2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.78■□□□□ 0.44
Lrrk1Q3UHC2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrk1Q3UHC2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Lrrk1Q3UHC2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrk1Q3UHC2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lrrk1Q3UHC2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrk1Q3UHC2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrk1Q3UHC2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Lrrk1Q3UHC2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrk1Q3UHC2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Lrrk1Q3UHC2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrk1Q3UHC2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrk1Q3UHC2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrk1Q3UHC2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lrrk1Q3UHC2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.77■□□□□ 0.44
Lrrk1Q3UHC2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lrrk1Q3UHC2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lrrk1Q3UHC2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lrrk1Q3UHC2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lrrk1Q3UHC2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Lrrk1Q3UHC2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Lrrk1Q3UHC2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrk1Q3UHC2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrk1Q3UHC2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Lrrk1Q3UHC2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.76■□□□□ 0.43
Lrrk1Q3UHC2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Lrrk1Q3UHC2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrk1Q3UHC2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrrk1Q3UHC2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Notumos-201ENSMUST00000151998 2659 ntBASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrrk1Q3UHC2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Gm13534-201ENSMUST00000121169 513 ntBASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrrk1Q3UHC2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrk1Q3UHC2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrk1Q3UHC2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.73■□□□□ 0.43
Lrrk1Q3UHC2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrk1Q3UHC2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrk1Q3UHC2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrrk1Q3UHC2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.73■□□□□ 0.43
Lrrk1Q3UHC2 Gm13148-201ENSMUST00000118892 745 ntBASIC17.73■□□□□ 0.43
Lrrk1Q3UHC2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms