Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CENPAP49450 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CENPAP49450 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CENPAP49450 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CENPAP49450 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CENPAP49450 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.48■□□□□ 0.71
CENPAP49450 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CENPAP49450 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
CENPAP49450 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
CENPAP49450 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.48■□□□□ 0.71
CENPAP49450 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
CENPAP49450 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CENPAP49450 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.48■□□□□ 0.71
CENPAP49450 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CENPAP49450 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CENPAP49450 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.48■□□□□ 0.71
CENPAP49450 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CENPAP49450 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CENPAP49450 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.47■□□□□ 0.71
CENPAP49450 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.47■□□□□ 0.71
CENPAP49450 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.47■□□□□ 0.71
CENPAP49450 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CENPAP49450 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.47■□□□□ 0.71
CENPAP49450 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPAP49450 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPAP49450 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CENPAP49450 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.46■□□□□ 0.71
CENPAP49450 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPAP49450 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.46■□□□□ 0.71
CENPAP49450 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.46■□□□□ 0.71
CENPAP49450 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.46■□□□□ 0.71
CENPAP49450 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CENPAP49450 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPAP49450 CA15P2-201ENST00000611168 834 ntBASIC19.46■□□□□ 0.71
CENPAP49450 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CENPAP49450 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPAP49450 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CENPAP49450 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPAP49450 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.46■□□□□ 0.71
CENPAP49450 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPAP49450 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.46■□□□□ 0.71
CENPAP49450 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPAP49450 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.46■□□□□ 0.71
CENPAP49450 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CENPAP49450 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.45■□□□□ 0.7
CENPAP49450 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CENPAP49450 GUSBP5-201ENST00000418136 578 ntBASIC19.45■□□□□ 0.7
CENPAP49450 AL499627.2-201ENST00000606283 725 ntBASIC19.45■□□□□ 0.7
CENPAP49450 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CENPAP49450 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CENPAP49450 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.45■□□□□ 0.7
CENPAP49450 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
CENPAP49450 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CENPAP49450 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CENPAP49450 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.44■□□□□ 0.7
CENPAP49450 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CENPAP49450 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPAP49450 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPAP49450 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.44■□□□□ 0.7
CENPAP49450 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPAP49450 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPAP49450 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPAP49450 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPAP49450 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPAP49450 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.44■□□□□ 0.7
CENPAP49450 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPAP49450 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CENPAP49450 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPAP49450 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.44■□□□□ 0.7
CENPAP49450 AC241377.3-202ENST00000626088 1088 ntBASIC19.44■□□□□ 0.7
CENPAP49450 AC241585.3-202ENST00000628937 1088 ntBASIC19.44■□□□□ 0.7
CENPAP49450 AC245100.8-202ENST00000629247 1058 ntBASIC19.44■□□□□ 0.7
CENPAP49450 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPAP49450 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.44■□□□□ 0.7
CENPAP49450 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.44■□□□□ 0.7
CENPAP49450 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CENPAP49450 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CENPAP49450 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPAP49450 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CENPAP49450 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPAP49450 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CENPAP49450 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CENPAP49450 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CENPAP49450 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CENPAP49450 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms