Protein–RNA interactions for Protein: P09007

SRD1, Pre-rRNA-processing protein SRD1, yeastyeast

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRD1P09007 RGI1YER067W 486 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)D1tK(CUU)D1 73 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)D2tK(CUU)D2 73 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)E1tK(CUU)E1 73 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)E2tK(CUU)E2 73 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)FtK(CUU)F 73 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)G1tK(CUU)G1 73 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)G2tK(CUU)G2 73 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)G3tK(CUU)G3 73 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)ItK(CUU)I 73 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)JtK(CUU)J 73 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)KtK(CUU)K 73 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)MtK(CUU)M 73 nt4.73□□□□□ -1.65
SRD1P09007 tK(CUU)PtK(CUU)P 73 nt4.73□□□□□ -1.65
SRD1P09007 ERV29YGR284C 933 nt4.73□□□□□ -1.65
SRD1P09007 IKI1YHR187W 930 nt4.73□□□□□ -1.65
SRD1P09007 BNA1YJR025C 534 nt4.73□□□□□ -1.65
SRD1P09007 FBP1YLR377C 1047 nt4.73□□□□□ -1.65
SRD1P09007 YCL007CYCL007C 393 nt4.73□□□□□ -1.65
SRD1P09007 BBC1YJL020C 3474 nt4.73□□□□□ -1.65
SRD1P09007 SBE2YDR351W 2595 nt4.73□□□□□ -1.65
SRD1P09007 SYF1YDR416W 2580 nt4.73□□□□□ -1.65
SRD1P09007 GPR1YDL035C 2886 nt4.73□□□□□ -1.65
SRD1P09007 FAA3YIL009W 2085 nt4.73□□□□□ -1.65
SRD1P09007 JHD2YJR119C 2187 nt4.72□□□□□ -1.65
SRD1P09007 DSL1YNL258C 2265 nt4.72□□□□□ -1.65
SRD1P09007 YDR355CYDR355C 303 nt4.72□□□□□ -1.65
SRD1P09007 RMR1YGL250W 726 nt4.72□□□□□ -1.65
SRD1P09007 YKL131WYKL131W 522 nt4.72□□□□□ -1.65
SRD1P09007 YNL181WYNL181W 1224 nt4.72□□□□□ -1.65
SRD1P09007 MRP21YBL090W 534 nt4.72□□□□□ -1.65
SRD1P09007 PSF3YOL146W 585 nt4.72□□□□□ -1.65
SRD1P09007 HPA2YPR193C 471 nt4.72□□□□□ -1.65
SRD1P09007 UGA3YDL170W 1587 nt4.72□□□□□ -1.65
SRD1P09007 UBX5YDR330W 1503 nt4.72□□□□□ -1.65
SRD1P09007 IDS2YJL146W 1410 nt4.72□□□□□ -1.65
SRD1P09007 snR7-SsnR7-S 179 nt4.71□□□□□ -1.66
SRD1P09007 GUK1YDR454C 564 nt4.71□□□□□ -1.66
SRD1P09007 YGR064WYGR064W 369 nt4.71□□□□□ -1.66
SRD1P09007 CDC12YHR107C 1224 nt4.71□□□□□ -1.66
SRD1P09007 ATG38YLR211C 681 nt4.71□□□□□ -1.66
SRD1P09007 NIS1YNL078W 1224 nt4.71□□□□□ -1.66
SRD1P09007 TRM112YNR046W 408 nt4.71□□□□□ -1.66
SRD1P09007 RPS11BYBR048W 471 nt4.71□□□□□ -1.66
SRD1P09007 SPN1YPR133C 1233 nt4.71□□□□□ -1.66
SRD1P09007 CUE3YGL110C 1875 nt4.71□□□□□ -1.66
SRD1P09007 THS1YIL078W 2205 nt4.7□□□□□ -1.66
SRD1P09007 SPH1YLR313C 1593 nt4.7□□□□□ -1.66
SRD1P09007 NTH1YDR001C 2256 nt4.7□□□□□ -1.66
SRD1P09007 ABF1YKL112W 2196 nt4.7□□□□□ -1.66
SRD1P09007 PER1YCR044C 1074 nt4.7□□□□□ -1.66
SRD1P09007 YDR203WYDR203W 318 nt4.7□□□□□ -1.66
SRD1P09007 BSC2YDR275W 708 nt4.7□□□□□ -1.66
SRD1P09007 RPS25AYGR027C 327 nt4.7□□□□□ -1.66
SRD1P09007 YGR115CYGR115C 780 nt4.7□□□□□ -1.66
SRD1P09007 YGR269WYGR269W 327 nt4.7□□□□□ -1.66
SRD1P09007 RPS30AYLR287C-A 192 nt4.7□□□□□ -1.66
SRD1P09007 IBD2YNL164C 1056 nt4.7□□□□□ -1.66
SRD1P09007 SPR2YOR214C 711 nt4.7□□□□□ -1.66
SRD1P09007 FIG1YBR040W 897 nt4.7□□□□□ -1.66
SRD1P09007 snR37snR37 386 nt4.7□□□□□ -1.66
SRD1P09007 ARP9YMR033W 1404 nt4.7□□□□□ -1.66
SRD1P09007 TPD3YAL016W 1908 nt4.7□□□□□ -1.66
SRD1P09007 FLO8YER109C 2400 nt4.7□□□□□ -1.66
SRD1P09007 GLO3YER122C 1482 nt4.69□□□□□ -1.66
SRD1P09007 AIM14YGL160W 1713 nt4.69□□□□□ -1.66
SRD1P09007 REF2YDR195W 1602 nt4.69□□□□□ -1.66
SRD1P09007 APA2YDR530C 978 nt4.69□□□□□ -1.66
SRD1P09007 YFL012W-AYFL012W-A 375 nt4.69□□□□□ -1.66
SRD1P09007 tL(UAG)JtL(UAG)J 82 nt4.69□□□□□ -1.66
SRD1P09007 tL(UAG)L1tL(UAG)L1 82 nt4.69□□□□□ -1.66
SRD1P09007 tL(UAG)L2tL(UAG)L2 82 nt4.69□□□□□ -1.66
SRD1P09007 YIP5YGL161C 933 nt4.69□□□□□ -1.66
SRD1P09007 MRP4YHL004W 1185 nt4.69□□□□□ -1.66
SRD1P09007 LOH1YJL038C 660 nt4.69□□□□□ -1.66
SRD1P09007 YNR071CYNR071C 1029 nt4.69□□□□□ -1.66
SRD1P09007 MDY2YOL111C 639 nt4.69□□□□□ -1.66
SRD1P09007 RAS1YOR101W 930 nt4.69□□□□□ -1.66
SRD1P09007 YPL162CYPL162C 822 nt4.69□□□□□ -1.66
SRD1P09007 MUD1YBR119W 897 nt4.69□□□□□ -1.66
SRD1P09007 MSS4YDR208W 2340 nt4.69□□□□□ -1.66
SRD1P09007 TGL4YKR089C 2733 nt4.69□□□□□ -1.66
SRD1P09007 OCA5YHL029C 2040 nt4.68□□□□□ -1.66
SRD1P09007 PAH1YMR165C 2589 nt4.68□□□□□ -1.66
SRD1P09007 RAV2YDR202C 1056 nt4.68□□□□□ -1.66
SRD1P09007 YGR026WYGR026W 837 nt4.68□□□□□ -1.66
SRD1P09007 GTR2YGR163W 1026 nt4.68□□□□□ -1.66
SRD1P09007 MMF1YIL051C 438 nt4.68□□□□□ -1.66
SRD1P09007 GPP1YIL053W 753 nt4.68□□□□□ -1.66
SRD1P09007 CCE1YKL011C 1062 nt4.68□□□□□ -1.66
SRD1P09007 GPX1YKL026C 504 nt4.68□□□□□ -1.66
SRD1P09007 KTR2YKR061W 1278 nt4.68□□□□□ -1.66
SRD1P09007 ARC40YBR234C 1155 nt4.68□□□□□ -1.66
SRD1P09007 BOP2YLR267W 1713 nt4.68□□□□□ -1.66
SRD1P09007 PGM2YMR105C 1710 nt4.68□□□□□ -1.66
SRD1P09007 NUP2YLR335W 2163 nt4.68□□□□□ -1.66
SRD1P09007 PRP43YGL120C 2304 nt4.68□□□□□ -1.66
SRD1P09007 DIT2YDR402C 1470 nt4.68□□□□□ -1.66
SRD1P09007 DPP1YDR284C 870 nt4.67□□□□□ -1.66
SRD1P09007 YER084WYER084W 387 nt4.67□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms