Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Tp53P02340 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.72■□□□□ 0.91
Tp53P02340 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.72■□□□□ 0.91
Tp53P02340 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tp53P02340 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tp53P02340 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tp53P02340 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tp53P02340 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tp53P02340 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tp53P02340 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tp53P02340 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tp53P02340 Gm7860-201ENSMUST00000121190 879 ntBASIC20.71■□□□□ 0.91
Tp53P02340 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tp53P02340 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Tp53P02340 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tp53P02340 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tp53P02340 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tp53P02340 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tp53P02340 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tp53P02340 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tp53P02340 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tp53P02340 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tp53P02340 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.7■□□□□ 0.9
Tp53P02340 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Tp53P02340 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tp53P02340 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tp53P02340 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.7■□□□□ 0.9
Tp53P02340 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.7■□□□□ 0.9
Tp53P02340 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.7■□□□□ 0.9
Tp53P02340 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tp53P02340 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tp53P02340 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tp53P02340 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tp53P02340 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tp53P02340 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tp53P02340 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tp53P02340 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tp53P02340 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tp53P02340 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tp53P02340 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tp53P02340 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tp53P02340 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.69■□□□□ 0.9
Tp53P02340 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tp53P02340 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tp53P02340 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tp53P02340 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tp53P02340 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tp53P02340 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tp53P02340 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tp53P02340 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.69■□□□□ 0.9
Tp53P02340 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tp53P02340 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tp53P02340 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tp53P02340 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.68■□□□□ 0.9
Tp53P02340 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tp53P02340 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tp53P02340 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tp53P02340 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.68■□□□□ 0.9
Tp53P02340 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tp53P02340 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tp53P02340 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Tp53P02340 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tp53P02340 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tp53P02340 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tp53P02340 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.67■□□□□ 0.9
Tp53P02340 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tp53P02340 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tp53P02340 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tp53P02340 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.67■□□□□ 0.9
Tp53P02340 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.67■□□□□ 0.9
Tp53P02340 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
Tp53P02340 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tp53P02340 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tp53P02340 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tp53P02340 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.67■□□□□ 0.9
Tp53P02340 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tp53P02340 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tp53P02340 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tp53P02340 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tp53P02340 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.66■□□□□ 0.9
Tp53P02340 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tp53P02340 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tp53P02340 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tp53P02340 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tp53P02340 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tp53P02340 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tp53P02340 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tp53P02340 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tp53P02340 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.65■□□□□ 0.9
Tp53P02340 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tp53P02340 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tp53P02340 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tp53P02340 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.65■□□□□ 0.9
Tp53P02340 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Tp53P02340 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tp53P02340 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tp53P02340 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tp53P02340 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tp53P02340 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tp53P02340 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms