Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Abcd4O89016 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Abcd4O89016 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcd4O89016 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Abcd4O89016 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.23■□□□□ 0.35
Abcd4O89016 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Abcd4O89016 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Abcd4O89016 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcd4O89016 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Abcd4O89016 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcd4O89016 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcd4O89016 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcd4O89016 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Abcd4O89016 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcd4O89016 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcd4O89016 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Abcd4O89016 Gm13234-201ENSMUST00000120010 747 ntBASIC17.22■□□□□ 0.35
Abcd4O89016 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.22■□□□□ 0.35
Abcd4O89016 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.22■□□□□ 0.35
Abcd4O89016 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Abcd4O89016 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.22■□□□□ 0.35
Abcd4O89016 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcd4O89016 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcd4O89016 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcd4O89016 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcd4O89016 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.22■□□□□ 0.35
Abcd4O89016 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Abcd4O89016 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcd4O89016 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Abcd4O89016 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Abcd4O89016 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Abcd4O89016 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcd4O89016 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Abcd4O89016 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcd4O89016 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcd4O89016 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcd4O89016 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcd4O89016 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Abcd4O89016 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Abcd4O89016 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Abcd4O89016 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Abcd4O89016 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Abcd4O89016 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.21■□□□□ 0.35
Abcd4O89016 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Abcd4O89016 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Abcd4O89016 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Abcd4O89016 Reep4-203ENSMUST00000226563 1444 ntBASIC17.21■□□□□ 0.34
Abcd4O89016 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcd4O89016 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcd4O89016 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Abcd4O89016 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Abcd4O89016 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Abcd4O89016 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.2■□□□□ 0.34
Abcd4O89016 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.2■□□□□ 0.34
Abcd4O89016 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcd4O89016 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcd4O89016 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcd4O89016 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.2■□□□□ 0.34
Abcd4O89016 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Abcd4O89016 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Abcd4O89016 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcd4O89016 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Abcd4O89016 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Abcd4O89016 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcd4O89016 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcd4O89016 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Abcd4O89016 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Abcd4O89016 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Abcd4O89016 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Abcd4O89016 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcd4O89016 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.18■□□□□ 0.34
Abcd4O89016 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcd4O89016 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcd4O89016 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Abcd4O89016 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.18■□□□□ 0.34
Abcd4O89016 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Abcd4O89016 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcd4O89016 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcd4O89016 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.18■□□□□ 0.34
Abcd4O89016 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcd4O89016 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
Abcd4O89016 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcd4O89016 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Abcd4O89016 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.17■□□□□ 0.34
Abcd4O89016 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Abcd4O89016 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcd4O89016 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcd4O89016 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Abcd4O89016 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Abcd4O89016 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcd4O89016 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcd4O89016 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Abcd4O89016 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcd4O89016 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.17■□□□□ 0.34
Abcd4O89016 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Abcd4O89016 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.17■□□□□ 0.34
Abcd4O89016 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Abcd4O89016 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Abcd4O89016 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms