Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a6O35544 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a6O35544 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a6O35544 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a6O35544 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a6O35544 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a6O35544 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc1a6O35544 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a6O35544 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a6O35544 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a6O35544 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.81■□□□□ 0.6
Slc1a6O35544 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.81■□□□□ 0.6
Slc1a6O35544 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a6O35544 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.81■□□□□ 0.6
Slc1a6O35544 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a6O35544 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a6O35544 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a6O35544 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a6O35544 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.81■□□□□ 0.6
Slc1a6O35544 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.81■□□□□ 0.6
Slc1a6O35544 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a6O35544 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc1a6O35544 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a6O35544 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a6O35544 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a6O35544 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.8■□□□□ 0.6
Slc1a6O35544 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Slc1a6O35544 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.8■□□□□ 0.6
Slc1a6O35544 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a6O35544 Gm15820-201ENSMUST00000201566 728 ntBASIC18.8■□□□□ 0.6
Slc1a6O35544 Serp2-204ENSMUST00000228055 705 ntBASIC18.8■□□□□ 0.6
Slc1a6O35544 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a6O35544 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a6O35544 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a6O35544 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a6O35544 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.8■□□□□ 0.6
Slc1a6O35544 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a6O35544 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Slc1a6O35544 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc1a6O35544 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Slc1a6O35544 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a6O35544 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a6O35544 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a6O35544 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a6O35544 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a6O35544 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.79■□□□□ 0.6
Slc1a6O35544 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Slc1a6O35544 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a6O35544 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.79■□□□□ 0.6
Slc1a6O35544 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Slc1a6O35544 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a6O35544 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.79■□□□□ 0.6
Slc1a6O35544 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a6O35544 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a6O35544 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc1a6O35544 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a6O35544 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a6O35544 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a6O35544 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.78■□□□□ 0.6
Slc1a6O35544 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Slc1a6O35544 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Slc1a6O35544 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a6O35544 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a6O35544 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slc1a6O35544 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a6O35544 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc1a6O35544 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slc1a6O35544 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc1a6O35544 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc1a6O35544 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slc1a6O35544 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slc1a6O35544 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.77■□□□□ 0.6
Slc1a6O35544 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Slc1a6O35544 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc1a6O35544 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Slc1a6O35544 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Slc1a6O35544 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Slc1a6O35544 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Slc1a6O35544 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a6O35544 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.76■□□□□ 0.59
Slc1a6O35544 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Slc1a6O35544 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.76■□□□□ 0.59
Slc1a6O35544 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a6O35544 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a6O35544 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.76■□□□□ 0.59
Slc1a6O35544 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a6O35544 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Slc1a6O35544 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Slc1a6O35544 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a6O35544 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a6O35544 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a6O35544 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a6O35544 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc1a6O35544 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc1a6O35544 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.75■□□□□ 0.59
Slc1a6O35544 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Slc1a6O35544 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc1a6O35544 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc1a6O35544 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc1a6O35544 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms