Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube3aO08759 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ube3aO08759 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ube3aO08759 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube3aO08759 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
Ube3aO08759 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Ube3aO08759 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.62■□□□□ 0.89
Ube3aO08759 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Ube3aO08759 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube3aO08759 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube3aO08759 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube3aO08759 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube3aO08759 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube3aO08759 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube3aO08759 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ube3aO08759 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ube3aO08759 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ube3aO08759 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ube3aO08759 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube3aO08759 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ube3aO08759 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube3aO08759 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ube3aO08759 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube3aO08759 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube3aO08759 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ube3aO08759 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ube3aO08759 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.6■□□□□ 0.89
Ube3aO08759 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ube3aO08759 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
Ube3aO08759 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ube3aO08759 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.6■□□□□ 0.89
Ube3aO08759 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube3aO08759 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube3aO08759 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ube3aO08759 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ube3aO08759 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube3aO08759 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ube3aO08759 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
Ube3aO08759 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube3aO08759 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube3aO08759 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ube3aO08759 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.59■□□□□ 0.89
Ube3aO08759 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ube3aO08759 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube3aO08759 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Ube3aO08759 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube3aO08759 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ube3aO08759 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.58■□□□□ 0.89
Ube3aO08759 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.58■□□□□ 0.89
Ube3aO08759 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ube3aO08759 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Ube3aO08759 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube3aO08759 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.58■□□□□ 0.89
Ube3aO08759 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube3aO08759 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ube3aO08759 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ube3aO08759 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Ube3aO08759 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.58■□□□□ 0.88
Ube3aO08759 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ube3aO08759 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ube3aO08759 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube3aO08759 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ube3aO08759 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube3aO08759 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube3aO08759 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube3aO08759 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube3aO08759 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube3aO08759 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ube3aO08759 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ube3aO08759 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube3aO08759 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ube3aO08759 Gm15039-201ENSMUST00000118914 875 ntBASIC20.56■□□□□ 0.88
Ube3aO08759 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ube3aO08759 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.56■□□□□ 0.88
Ube3aO08759 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube3aO08759 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube3aO08759 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube3aO08759 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
Ube3aO08759 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube3aO08759 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ube3aO08759 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube3aO08759 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.55■□□□□ 0.88
Ube3aO08759 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.55■□□□□ 0.88
Ube3aO08759 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ube3aO08759 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube3aO08759 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.55■□□□□ 0.88
Ube3aO08759 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms