Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT2A6NDA9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRIT2A6NDA9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRIT2A6NDA9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRIT2A6NDA9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.58■□□□□ 0.89
LRIT2A6NDA9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRIT2A6NDA9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
LRIT2A6NDA9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
LRIT2A6NDA9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
LRIT2A6NDA9 MIR572-201ENST00000384983 95 ntBASIC20.58■□□□□ 0.89
LRIT2A6NDA9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRIT2A6NDA9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.58■□□□□ 0.89
LRIT2A6NDA9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.58■□□□□ 0.89
LRIT2A6NDA9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
LRIT2A6NDA9 SMUG1P1-201ENST00000590640 811 ntBASIC20.58■□□□□ 0.89
LRIT2A6NDA9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.58■□□□□ 0.88
LRIT2A6NDA9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRIT2A6NDA9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRIT2A6NDA9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.58■□□□□ 0.88
LRIT2A6NDA9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.57■□□□□ 0.88
LRIT2A6NDA9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT2A6NDA9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT2A6NDA9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT2A6NDA9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.56■□□□□ 0.88
LRIT2A6NDA9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT2A6NDA9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT2A6NDA9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRIT2A6NDA9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.56■□□□□ 0.88
LRIT2A6NDA9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LRIT2A6NDA9 C11orf96-202ENST00000528572 1834 ntBASIC20.56■□□□□ 0.88
LRIT2A6NDA9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.56■□□□□ 0.88
LRIT2A6NDA9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
LRIT2A6NDA9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 AC105265.2-201ENST00000467189 838 ntBASIC20.55■□□□□ 0.88
LRIT2A6NDA9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 AC105233.4-201ENST00000642045 216 ntBASIC20.55■□□□□ 0.88
LRIT2A6NDA9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LRIT2A6NDA9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.54■□□□□ 0.88
LRIT2A6NDA9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LRIT2A6NDA9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRIT2A6NDA9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRIT2A6NDA9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.54■□□□□ 0.88
LRIT2A6NDA9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.54■□□□□ 0.88
LRIT2A6NDA9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRIT2A6NDA9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRIT2A6NDA9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRIT2A6NDA9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRIT2A6NDA9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRIT2A6NDA9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRIT2A6NDA9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRIT2A6NDA9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRIT2A6NDA9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.53■□□□□ 0.88
LRIT2A6NDA9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRIT2A6NDA9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRIT2A6NDA9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LRIT2A6NDA9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.53■□□□□ 0.88
LRIT2A6NDA9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.53■□□□□ 0.88
LRIT2A6NDA9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms