Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.24■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.23■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.23■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.22■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Gm13146-201ENSMUST00000118508 780 ntBASIC20.22■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.22■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.21■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.21■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mindy4b-psA0A1W2P7H6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Gm27405-201ENSMUST00000184201 112 ntBASIC20.2■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.19■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Gm7291-201ENSMUST00000199147 382 ntBASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.17■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.16■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.15■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Gm7514-201ENSMUST00000209475 934 ntBASIC20.15■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.15■□□□□ 0.82
Mindy4b-psA0A1W2P7H6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms