Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 AL035685.1-201ENST00000636663 812 ntBASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV30A0A087WSZ9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV30A0A087WSZ9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 pRNA.6-201ENST00000610482 90 ntBASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 pRNA.5-201ENST00000612139 90 ntBASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 pRNA.11-201ENST00000618423 90 ntBASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 pRNA.13-201ENST00000619112 90 ntBASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV30A0A087WSZ9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 MIR3621-201ENST00000580529 85 ntBASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV30A0A087WSZ9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.89■□□□□ 0.3
TRAV30A0A087WSZ9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV30A0A087WSZ9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.89■□□□□ 0.3
TRAV30A0A087WSZ9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV30A0A087WSZ9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 GUSBP5-201ENST00000418136 578 ntBASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 SRD5A1P1-201ENST00000442297 786 ntBASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 AC087239.1-201ENST00000622671 572 ntBASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 AL031602.1-201ENST00000633169 911 ntBASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV30A0A087WSZ9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV30A0A087WSZ9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV30A0A087WSZ9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
TRAV30A0A087WSZ9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TRAV30A0A087WSZ9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV30A0A087WSZ9 AC079089.2-201ENST00000531211 1277 ntBASIC16.88■□□□□ 0.29
TRAV30A0A087WSZ9 AC099791.2-201ENST00000605725 427 ntBASIC16.88■□□□□ 0.29
TRAV30A0A087WSZ9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV30A0A087WSZ9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV30A0A087WSZ9 FBXW4P1-201ENST00000426721 2239 ntBASIC16.88■□□□□ 0.29
TRAV30A0A087WSZ9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV30A0A087WSZ9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms