Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav13-2A0A075B649 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav13-2A0A075B649 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav13-2A0A075B649 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-2A0A075B649 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-2A0A075B649 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-2A0A075B649 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav13-2A0A075B649 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav13-2A0A075B649 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-2A0A075B649 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav13-2A0A075B649 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-2A0A075B649 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-2A0A075B649 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-2A0A075B649 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13-2A0A075B649 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Gm20100-201ENSMUST00000209418 2272 ntBASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13-2A0A075B649 Gm38342-201ENSMUST00000195710 2980 ntBASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Trav13-2A0A075B649 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Gm40881-201ENSMUST00000223397 166 ntBASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13-2A0A075B649 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13-2A0A075B649 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav13-2A0A075B649 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms