Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8-1A0A075B641 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav8-1A0A075B641 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8-1A0A075B641 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8-1A0A075B641 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8-1A0A075B641 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8-1A0A075B641 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8-1A0A075B641 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav8-1A0A075B641 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8-1A0A075B641 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8-1A0A075B641 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8-1A0A075B641 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav8-1A0A075B641 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.71□□□□□ -0.22
Trav8-1A0A075B641 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Trav8-1A0A075B641 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav8-1A0A075B641 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trav8-1A0A075B641 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav8-1A0A075B641 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8-1A0A075B641 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.69□□□□□ -0.22
Trav8-1A0A075B641 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav8-1A0A075B641 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav8-1A0A075B641 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms