Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Cx3cr1Q9Z0D9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cx3cr1Q9Z0D9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cx3cr1Q9Z0D9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cx3cr1Q9Z0D9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Cx3cr1Q9Z0D9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Cx3cr1Q9Z0D9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cx3cr1Q9Z0D9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cx3cr1Q9Z0D9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cx3cr1Q9Z0D9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cx3cr1Q9Z0D9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cx3cr1Q9Z0D9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.23■□□□□ 0.99
Cx3cr1Q9Z0D9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cx3cr1Q9Z0D9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cx3cr1Q9Z0D9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cx3cr1Q9Z0D9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cx3cr1Q9Z0D9 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.21■□□□□ 0.99
Cx3cr1Q9Z0D9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cx3cr1Q9Z0D9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cx3cr1Q9Z0D9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cx3cr1Q9Z0D9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cx3cr1Q9Z0D9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cx3cr1Q9Z0D9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cx3cr1Q9Z0D9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cx3cr1Q9Z0D9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cx3cr1Q9Z0D9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cx3cr1Q9Z0D9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.16■□□□□ 0.98
Cx3cr1Q9Z0D9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cx3cr1Q9Z0D9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cx3cr1Q9Z0D9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cx3cr1Q9Z0D9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cx3cr1Q9Z0D9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cx3cr1Q9Z0D9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cx3cr1Q9Z0D9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.14■□□□□ 0.97
Cx3cr1Q9Z0D9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cx3cr1Q9Z0D9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.13■□□□□ 0.97
Cx3cr1Q9Z0D9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.12■□□□□ 0.97
Cx3cr1Q9Z0D9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cx3cr1Q9Z0D9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cx3cr1Q9Z0D9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cx3cr1Q9Z0D9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cx3cr1Q9Z0D9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cx3cr1Q9Z0D9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cx3cr1Q9Z0D9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cx3cr1Q9Z0D9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cx3cr1Q9Z0D9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.07■□□□□ 0.96
Cx3cr1Q9Z0D9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cx3cr1Q9Z0D9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cx3cr1Q9Z0D9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cx3cr1Q9Z0D9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cx3cr1Q9Z0D9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.06■□□□□ 0.96
Cx3cr1Q9Z0D9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.04■□□□□ 0.96
Cx3cr1Q9Z0D9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cx3cr1Q9Z0D9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.04■□□□□ 0.96
Cx3cr1Q9Z0D9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cx3cr1Q9Z0D9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cx3cr1Q9Z0D9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cx3cr1Q9Z0D9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cx3cr1Q9Z0D9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cx3cr1Q9Z0D9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Cx3cr1Q9Z0D9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cx3cr1Q9Z0D9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cx3cr1Q9Z0D9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
Cx3cr1Q9Z0D9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cx3cr1Q9Z0D9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.02■□□□□ 0.96
Cx3cr1Q9Z0D9 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.01■□□□□ 0.95
Cx3cr1Q9Z0D9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Cx3cr1Q9Z0D9 Gm25262-201ENSMUST00000174934 133 ntBASIC20.98■□□□□ 0.95
Cx3cr1Q9Z0D9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cx3cr1Q9Z0D9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cx3cr1Q9Z0D9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cx3cr1Q9Z0D9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cx3cr1Q9Z0D9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cx3cr1Q9Z0D9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cx3cr1Q9Z0D9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cx3cr1Q9Z0D9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cx3cr1Q9Z0D9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cx3cr1Q9Z0D9 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.96■□□□□ 0.95
Cx3cr1Q9Z0D9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cx3cr1Q9Z0D9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cx3cr1Q9Z0D9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cx3cr1Q9Z0D9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cx3cr1Q9Z0D9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cx3cr1Q9Z0D9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cx3cr1Q9Z0D9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cx3cr1Q9Z0D9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cx3cr1Q9Z0D9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.92■□□□□ 0.94
Cx3cr1Q9Z0D9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cx3cr1Q9Z0D9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cx3cr1Q9Z0D9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cx3cr1Q9Z0D9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cx3cr1Q9Z0D9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cx3cr1Q9Z0D9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cx3cr1Q9Z0D9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cx3cr1Q9Z0D9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.9■□□□□ 0.94
Cx3cr1Q9Z0D9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cx3cr1Q9Z0D9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cx3cr1Q9Z0D9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cx3cr1Q9Z0D9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cx3cr1Q9Z0D9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 159 ms