Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CcsQ9WU84 Gm27322-201ENSMUST00000184007 104 ntBASIC19.2■□□□□ 0.66
CcsQ9WU84 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CcsQ9WU84 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CcsQ9WU84 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CcsQ9WU84 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CcsQ9WU84 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CcsQ9WU84 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CcsQ9WU84 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.15■□□□□ 0.66
CcsQ9WU84 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CcsQ9WU84 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CcsQ9WU84 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CcsQ9WU84 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CcsQ9WU84 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CcsQ9WU84 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CcsQ9WU84 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CcsQ9WU84 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CcsQ9WU84 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CcsQ9WU84 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CcsQ9WU84 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CcsQ9WU84 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CcsQ9WU84 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CcsQ9WU84 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CcsQ9WU84 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CcsQ9WU84 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.07■□□□□ 0.64
CcsQ9WU84 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CcsQ9WU84 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CcsQ9WU84 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CcsQ9WU84 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CcsQ9WU84 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CcsQ9WU84 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CcsQ9WU84 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CcsQ9WU84 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CcsQ9WU84 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcsQ9WU84 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcsQ9WU84 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcsQ9WU84 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcsQ9WU84 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CcsQ9WU84 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CcsQ9WU84 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CcsQ9WU84 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CcsQ9WU84 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CcsQ9WU84 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CcsQ9WU84 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CcsQ9WU84 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.02■□□□□ 0.64
CcsQ9WU84 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CcsQ9WU84 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CcsQ9WU84 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.02■□□□□ 0.63
CcsQ9WU84 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CcsQ9WU84 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CcsQ9WU84 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CcsQ9WU84 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CcsQ9WU84 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CcsQ9WU84 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CcsQ9WU84 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CcsQ9WU84 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CcsQ9WU84 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CcsQ9WU84 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.97■□□□□ 0.63
CcsQ9WU84 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CcsQ9WU84 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CcsQ9WU84 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CcsQ9WU84 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CcsQ9WU84 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CcsQ9WU84 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.93■□□□□ 0.62
CcsQ9WU84 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CcsQ9WU84 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CcsQ9WU84 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CcsQ9WU84 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.93■□□□□ 0.62
CcsQ9WU84 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CcsQ9WU84 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CcsQ9WU84 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CcsQ9WU84 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CcsQ9WU84 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.91■□□□□ 0.62
CcsQ9WU84 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CcsQ9WU84 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CcsQ9WU84 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CcsQ9WU84 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CcsQ9WU84 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CcsQ9WU84 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CcsQ9WU84 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.87■□□□□ 0.61
CcsQ9WU84 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CcsQ9WU84 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CcsQ9WU84 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CcsQ9WU84 Gm24804-201ENSMUST00000174982 85 ntBASIC18.85■□□□□ 0.61
CcsQ9WU84 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CcsQ9WU84 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CcsQ9WU84 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CcsQ9WU84 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CcsQ9WU84 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CcsQ9WU84 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CcsQ9WU84 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CcsQ9WU84 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CcsQ9WU84 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.8■□□□□ 0.6
CcsQ9WU84 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CcsQ9WU84 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CcsQ9WU84 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.79■□□□□ 0.6
CcsQ9WU84 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CcsQ9WU84 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CcsQ9WU84 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CcsQ9WU84 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms