Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nubp1Q9R060 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Nubp1Q9R060 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Nubp1Q9R060 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
Nubp1Q9R060 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nubp1Q9R060 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.2■■□□□ 1.14
Nubp1Q9R060 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Nubp1Q9R060 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Nubp1Q9R060 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Nubp1Q9R060 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Nubp1Q9R060 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Nubp1Q9R060 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.16■■□□□ 1.14
Nubp1Q9R060 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.16■■□□□ 1.14
Nubp1Q9R060 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Nubp1Q9R060 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Nubp1Q9R060 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Nubp1Q9R060 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Nubp1Q9R060 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.13■■□□□ 1.13
Nubp1Q9R060 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.13■■□□□ 1.13
Nubp1Q9R060 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
Nubp1Q9R060 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.11■■□□□ 1.13
Nubp1Q9R060 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nubp1Q9R060 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Nubp1Q9R060 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Nubp1Q9R060 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Nubp1Q9R060 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Nubp1Q9R060 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nubp1Q9R060 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Nubp1Q9R060 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Nubp1Q9R060 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Nubp1Q9R060 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Nubp1Q9R060 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.05■■□□□ 1.12
Nubp1Q9R060 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Nubp1Q9R060 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nubp1Q9R060 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22■■□□□ 1.11
Nubp1Q9R060 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.99■■□□□ 1.11
Nubp1Q9R060 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Nubp1Q9R060 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Nubp1Q9R060 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nubp1Q9R060 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.96■■□□□ 1.11
Nubp1Q9R060 Gm7432-201ENSMUST00000210343 879 ntBASIC21.96■■□□□ 1.11
Nubp1Q9R060 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nubp1Q9R060 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nubp1Q9R060 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.95■■□□□ 1.1
Nubp1Q9R060 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.94■■□□□ 1.1
Nubp1Q9R060 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nubp1Q9R060 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.93■■□□□ 1.1
Nubp1Q9R060 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Nubp1Q9R060 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Nubp1Q9R060 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nubp1Q9R060 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Nubp1Q9R060 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Nubp1Q9R060 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Nubp1Q9R060 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nubp1Q9R060 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nubp1Q9R060 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nubp1Q9R060 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.85■■□□□ 1.09
Nubp1Q9R060 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.09
Nubp1Q9R060 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Nubp1Q9R060 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nubp1Q9R060 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nubp1Q9R060 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nubp1Q9R060 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nubp1Q9R060 Nkain2-201ENSMUST00000092602 558 ntBASIC21.82■■□□□ 1.08
Nubp1Q9R060 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nubp1Q9R060 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nubp1Q9R060 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Nubp1Q9R060 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.81■■□□□ 1.08
Nubp1Q9R060 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.8■■□□□ 1.08
Nubp1Q9R060 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nubp1Q9R060 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
Nubp1Q9R060 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nubp1Q9R060 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Nubp1Q9R060 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Nubp1Q9R060 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nubp1Q9R060 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nubp1Q9R060 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nubp1Q9R060 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.77■■□□□ 1.08
Nubp1Q9R060 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Nubp1Q9R060 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nubp1Q9R060 Mir6538-201ENSMUST00000183713 110 ntBASIC21.75■■□□□ 1.07
Nubp1Q9R060 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nubp1Q9R060 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Nubp1Q9R060 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nubp1Q9R060 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nubp1Q9R060 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nubp1Q9R060 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Nubp1Q9R060 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nubp1Q9R060 Gm11599-201ENSMUST00000118720 878 ntBASIC21.72■■□□□ 1.07
Nubp1Q9R060 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.72■■□□□ 1.07
Nubp1Q9R060 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nubp1Q9R060 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nubp1Q9R060 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nubp1Q9R060 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.68■■□□□ 1.06
Nubp1Q9R060 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Nubp1Q9R060 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nubp1Q9R060 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nubp1Q9R060 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nubp1Q9R060 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.67■■□□□ 1.06
Nubp1Q9R060 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms