Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27,32■■□□□ 1,96
Scn5aQ9JJV9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27,32■■□□□ 1,96
Scn5aQ9JJV9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27,29■■□□□ 1,96
Scn5aQ9JJV9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27,29■■□□□ 1,96
Scn5aQ9JJV9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27,29■■□□□ 1,96
Scn5aQ9JJV9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27,29■■□□□ 1,96
Scn5aQ9JJV9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27,28■■□□□ 1,96
Scn5aQ9JJV9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27,28■■□□□ 1,96
Scn5aQ9JJV9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27,27■■□□□ 1,96
Scn5aQ9JJV9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27,26■■□□□ 1,95
Scn5aQ9JJV9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27,24■■□□□ 1,95
Scn5aQ9JJV9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27,22■■□□□ 1,95
Scn5aQ9JJV9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27,22■■□□□ 1,95
Scn5aQ9JJV9 Gm5987-201ENSMUST00000196433 1151 ntBASIC27,21■■□□□ 1,95
Scn5aQ9JJV9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27,19■■□□□ 1,94
Scn5aQ9JJV9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27,19■■□□□ 1,94
Scn5aQ9JJV9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27,18■■□□□ 1,94
Scn5aQ9JJV9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27,18■■□□□ 1,94
Scn5aQ9JJV9 Gm9939-201ENSMUST00000067161 1154 ntBASIC27,17■■□□□ 1,94
Scn5aQ9JJV9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27,17■■□□□ 1,94
Scn5aQ9JJV9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27,17■■□□□ 1,94
Scn5aQ9JJV9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27,15■■□□□ 1,94
Scn5aQ9JJV9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27,15■■□□□ 1,94
Scn5aQ9JJV9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27,15■■□□□ 1,94
Scn5aQ9JJV9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27,14■■□□□ 1,94
Scn5aQ9JJV9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27,13■■□□□ 1,93
Scn5aQ9JJV9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC27,13■■□□□ 1,93
Scn5aQ9JJV9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27,12■■□□□ 1,93
Scn5aQ9JJV9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27,12■■□□□ 1,93
Scn5aQ9JJV9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27,11■■□□□ 1,93
Scn5aQ9JJV9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27,1■■□□□ 1,93
Scn5aQ9JJV9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27,09■■□□□ 1,93
Scn5aQ9JJV9 Gm8503-201ENSMUST00000118131 455 ntBASIC27,07■■□□□ 1,92
Scn5aQ9JJV9 Gm43863-201ENSMUST00000203822 1192 ntBASIC27,07■■□□□ 1,92
Scn5aQ9JJV9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27,07■■□□□ 1,92
Scn5aQ9JJV9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27,05■■□□□ 1,92
Scn5aQ9JJV9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27,04■■□□□ 1,92
Scn5aQ9JJV9 AC157572.2-201ENSMUST00000226970 908 ntBASIC27,04■■□□□ 1,92
Scn5aQ9JJV9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27,03■■□□□ 1,92
Scn5aQ9JJV9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27,03■■□□□ 1,92
Scn5aQ9JJV9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27,03■■□□□ 1,92
Scn5aQ9JJV9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27,02■■□□□ 1,92
Scn5aQ9JJV9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27,02■■□□□ 1,92
Scn5aQ9JJV9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27,01■■□□□ 1,91
Scn5aQ9JJV9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1,91
Scn5aQ9JJV9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC27■■□□□ 1,91
Scn5aQ9JJV9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26,97■■□□□ 1,91
Scn5aQ9JJV9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26,96■■□□□ 1,91
Scn5aQ9JJV9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26,96■■□□□ 1,91
Scn5aQ9JJV9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26,96■■□□□ 1,91
Scn5aQ9JJV9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26,94■■□□□ 1,9
Scn5aQ9JJV9 Gm6821-201ENSMUST00000107540 542 ntBASIC26,92■■□□□ 1,9
Scn5aQ9JJV9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26,92■■□□□ 1,9
Scn5aQ9JJV9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26,92■■□□□ 1,9
Scn5aQ9JJV9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26,92■■□□□ 1,9
Scn5aQ9JJV9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26,92■■□□□ 1,9
Scn5aQ9JJV9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26,91■■□□□ 1,9
Scn5aQ9JJV9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26,89■■□□□ 1,9
Scn5aQ9JJV9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26,89■■□□□ 1,9
Scn5aQ9JJV9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26,89■■□□□ 1,89
Scn5aQ9JJV9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26,89■■□□□ 1,89
Scn5aQ9JJV9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,88■■□□□ 1,89
Scn5aQ9JJV9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26,88■■□□□ 1,89
Scn5aQ9JJV9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26,87■■□□□ 1,89
Scn5aQ9JJV9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26,87■■□□□ 1,89
Scn5aQ9JJV9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26,86■■□□□ 1,89
Scn5aQ9JJV9 Gm42809-201ENSMUST00000198429 1138 ntBASIC26,86■■□□□ 1,89
Scn5aQ9JJV9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Scn5aQ9JJV9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26,84■■□□□ 1,89
Scn5aQ9JJV9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26,84■■□□□ 1,89
Scn5aQ9JJV9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26,84■■□□□ 1,89
Scn5aQ9JJV9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26,83■■□□□ 1,89
Scn5aQ9JJV9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26,82■■□□□ 1,88
Scn5aQ9JJV9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26,82■■□□□ 1,88
Scn5aQ9JJV9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26,8■■□□□ 1,88
Scn5aQ9JJV9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26,8■■□□□ 1,88
Scn5aQ9JJV9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26,79■■□□□ 1,88
Scn5aQ9JJV9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26,79■■□□□ 1,88
Scn5aQ9JJV9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26,78■■□□□ 1,88
Scn5aQ9JJV9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26,78■■□□□ 1,88
Scn5aQ9JJV9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26,77■■□□□ 1,88
Scn5aQ9JJV9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26,77■■□□□ 1,88
Scn5aQ9JJV9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26,76■■□□□ 1,87
Scn5aQ9JJV9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26,75■■□□□ 1,87
Scn5aQ9JJV9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26,75■■□□□ 1,87
Scn5aQ9JJV9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26,74■■□□□ 1,87
Scn5aQ9JJV9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26,73■■□□□ 1,87
Scn5aQ9JJV9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26,73■■□□□ 1,87
Scn5aQ9JJV9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26,72■■□□□ 1,87
Scn5aQ9JJV9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26,72■■□□□ 1,87
Scn5aQ9JJV9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26,72■■□□□ 1,87
Scn5aQ9JJV9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26,69■■□□□ 1,86
Scn5aQ9JJV9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26,68■■□□□ 1,86
Scn5aQ9JJV9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26,67■■□□□ 1,86
Scn5aQ9JJV9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26,67■■□□□ 1,86
Scn5aQ9JJV9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26,67■■□□□ 1,86
Scn5aQ9JJV9 Gm30346-201ENSMUST00000218641 1699 ntBASIC26,66■■□□□ 1,86
Scn5aQ9JJV9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26,66■■□□□ 1,86
Scn5aQ9JJV9 Gm2415-204ENSMUST00000190235 2004 ntBASIC26,66■■□□□ 1,86
Scn5aQ9JJV9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26,66■■□□□ 1,86
Retrieved 100 of 76,532 protein–RNA pairs in 13,6 ms