Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rhox4bQ9JI43 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.05■□□□□ 0.8
Rhox4bQ9JI43 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rhox4bQ9JI43 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rhox4bQ9JI43 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rhox4bQ9JI43 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rhox4bQ9JI43 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.03■□□□□ 0.8
Rhox4bQ9JI43 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rhox4bQ9JI43 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Rhox4bQ9JI43 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rhox4bQ9JI43 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rhox4bQ9JI43 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rhox4bQ9JI43 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rhox4bQ9JI43 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rhox4bQ9JI43 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rhox4bQ9JI43 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rhox4bQ9JI43 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rhox4bQ9JI43 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rhox4bQ9JI43 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rhox4bQ9JI43 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.97■□□□□ 0.79
Rhox4bQ9JI43 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rhox4bQ9JI43 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rhox4bQ9JI43 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rhox4bQ9JI43 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Rhox4bQ9JI43 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rhox4bQ9JI43 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rhox4bQ9JI43 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Rhox4bQ9JI43 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rhox4bQ9JI43 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rhox4bQ9JI43 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rhox4bQ9JI43 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rhox4bQ9JI43 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rhox4bQ9JI43 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rhox4bQ9JI43 Mipep-204ENSMUST00000225043 1548 ntBASIC19.92■□□□□ 0.78
Rhox4bQ9JI43 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rhox4bQ9JI43 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rhox4bQ9JI43 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rhox4bQ9JI43 Rab21-202ENSMUST00000218831 843 ntBASIC19.91■□□□□ 0.78
Rhox4bQ9JI43 Amer2-203ENSMUST00000225247 2662 ntBASIC19.91■□□□□ 0.78
Rhox4bQ9JI43 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rhox4bQ9JI43 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rhox4bQ9JI43 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rhox4bQ9JI43 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rhox4bQ9JI43 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.9■□□□□ 0.78
Rhox4bQ9JI43 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rhox4bQ9JI43 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rhox4bQ9JI43 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rhox4bQ9JI43 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rhox4bQ9JI43 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rhox4bQ9JI43 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rhox4bQ9JI43 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rhox4bQ9JI43 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Rhox4bQ9JI43 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rhox4bQ9JI43 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.83■□□□□ 0.77
Rhox4bQ9JI43 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rhox4bQ9JI43 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rhox4bQ9JI43 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rhox4bQ9JI43 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rhox4bQ9JI43 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rhox4bQ9JI43 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rhox4bQ9JI43 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rhox4bQ9JI43 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rhox4bQ9JI43 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rhox4bQ9JI43 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Rhox4bQ9JI43 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.77■□□□□ 0.76
Rhox4bQ9JI43 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rhox4bQ9JI43 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.77■□□□□ 0.76
Rhox4bQ9JI43 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rhox4bQ9JI43 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.76■□□□□ 0.75
Rhox4bQ9JI43 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rhox4bQ9JI43 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.76■□□□□ 0.75
Rhox4bQ9JI43 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Rhox4bQ9JI43 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rhox4bQ9JI43 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rhox4bQ9JI43 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rhox4bQ9JI43 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rhox4bQ9JI43 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rhox4bQ9JI43 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rhox4bQ9JI43 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rhox4bQ9JI43 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rhox4bQ9JI43 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.73■□□□□ 0.75
Rhox4bQ9JI43 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.72■□□□□ 0.75
Rhox4bQ9JI43 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.72■□□□□ 0.75
Rhox4bQ9JI43 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.72■□□□□ 0.75
Rhox4bQ9JI43 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rhox4bQ9JI43 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rhox4bQ9JI43 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhox4bQ9JI43 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rhox4bQ9JI43 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rhox4bQ9JI43 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rhox4bQ9JI43 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.69■□□□□ 0.74
Rhox4bQ9JI43 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rhox4bQ9JI43 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rhox4bQ9JI43 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rhox4bQ9JI43 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rhox4bQ9JI43 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rhox4bQ9JI43 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rhox4bQ9JI43 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rhox4bQ9JI43 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Rhox4bQ9JI43 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms