Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfrsf13bQ9ET35 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf13bQ9ET35 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf13bQ9ET35 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Tnfrsf13bQ9ET35 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.93■□□□□ 0.78
Tnfrsf13bQ9ET35 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf13bQ9ET35 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf13bQ9ET35 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf13bQ9ET35 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf13bQ9ET35 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf13bQ9ET35 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.92■□□□□ 0.78
Tnfrsf13bQ9ET35 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf13bQ9ET35 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf13bQ9ET35 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf13bQ9ET35 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Tnfrsf13bQ9ET35 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.9■□□□□ 0.78
Tnfrsf13bQ9ET35 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf13bQ9ET35 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf13bQ9ET35 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.89■□□□□ 0.77
Tnfrsf13bQ9ET35 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf13bQ9ET35 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Tnfrsf13bQ9ET35 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.88■□□□□ 0.77
Tnfrsf13bQ9ET35 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf13bQ9ET35 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.87■□□□□ 0.77
Tnfrsf13bQ9ET35 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf13bQ9ET35 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Tnfrsf13bQ9ET35 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf13bQ9ET35 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tnfrsf13bQ9ET35 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.85■□□□□ 0.77
Tnfrsf13bQ9ET35 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf13bQ9ET35 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf13bQ9ET35 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfrsf13bQ9ET35 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.83■□□□□ 0.77
Tnfrsf13bQ9ET35 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf13bQ9ET35 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf13bQ9ET35 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tnfrsf13bQ9ET35 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tnfrsf13bQ9ET35 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfrsf13bQ9ET35 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tnfrsf13bQ9ET35 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Tnfrsf13bQ9ET35 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.79■□□□□ 0.76
Tnfrsf13bQ9ET35 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf13bQ9ET35 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf13bQ9ET35 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfrsf13bQ9ET35 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf13bQ9ET35 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Tnfrsf13bQ9ET35 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.78■□□□□ 0.76
Tnfrsf13bQ9ET35 Gm25262-201ENSMUST00000174934 133 ntBASIC19.78■□□□□ 0.76
Tnfrsf13bQ9ET35 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfrsf13bQ9ET35 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Tnfrsf13bQ9ET35 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.77■□□□□ 0.76
Tnfrsf13bQ9ET35 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf13bQ9ET35 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf13bQ9ET35 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf13bQ9ET35 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf13bQ9ET35 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.76■□□□□ 0.75
Tnfrsf13bQ9ET35 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf13bQ9ET35 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Tnfrsf13bQ9ET35 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf13bQ9ET35 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf13bQ9ET35 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf13bQ9ET35 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf13bQ9ET35 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf13bQ9ET35 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf13bQ9ET35 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.73■□□□□ 0.75
Tnfrsf13bQ9ET35 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf13bQ9ET35 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf13bQ9ET35 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf13bQ9ET35 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf13bQ9ET35 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf13bQ9ET35 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tnfrsf13bQ9ET35 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf13bQ9ET35 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.69■□□□□ 0.74
Tnfrsf13bQ9ET35 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf13bQ9ET35 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfrsf13bQ9ET35 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.67■□□□□ 0.74
Tnfrsf13bQ9ET35 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfrsf13bQ9ET35 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfrsf13bQ9ET35 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tnfrsf13bQ9ET35 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf13bQ9ET35 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf13bQ9ET35 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Tnfrsf13bQ9ET35 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf13bQ9ET35 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf13bQ9ET35 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.63■□□□□ 0.73
Tnfrsf13bQ9ET35 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Tnfrsf13bQ9ET35 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf13bQ9ET35 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf13bQ9ET35 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf13bQ9ET35 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Tnfrsf13bQ9ET35 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf13bQ9ET35 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf13bQ9ET35 Gm27322-201ENSMUST00000184007 104 ntBASIC19.59■□□□□ 0.73
Tnfrsf13bQ9ET35 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf13bQ9ET35 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfrsf13bQ9ET35 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Tnfrsf13bQ9ET35 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.57■□□□□ 0.72
Tnfrsf13bQ9ET35 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf13bQ9ET35 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tnfrsf13bQ9ET35 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms