Protein–RNA interactions for Protein: Q9D7H3

RtcA, RNA 3'-terminal phosphate cyclase, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcAQ9D7H3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
RtcAQ9D7H3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
RtcAQ9D7H3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
RtcAQ9D7H3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RtcAQ9D7H3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.89■■□□□ 1.58
RtcAQ9D7H3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RtcAQ9D7H3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
RtcAQ9D7H3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.89■■□□□ 1.58
RtcAQ9D7H3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RtcAQ9D7H3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RtcAQ9D7H3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.88■■□□□ 1.57
RtcAQ9D7H3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
RtcAQ9D7H3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RtcAQ9D7H3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RtcAQ9D7H3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RtcAQ9D7H3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RtcAQ9D7H3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RtcAQ9D7H3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
RtcAQ9D7H3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
RtcAQ9D7H3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
RtcAQ9D7H3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RtcAQ9D7H3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RtcAQ9D7H3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
RtcAQ9D7H3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
RtcAQ9D7H3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
RtcAQ9D7H3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.78■■□□□ 1.56
RtcAQ9D7H3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
RtcAQ9D7H3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
RtcAQ9D7H3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.75■■□□□ 1.55
RtcAQ9D7H3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
RtcAQ9D7H3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
RtcAQ9D7H3 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.74■■□□□ 1.55
RtcAQ9D7H3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.72■■□□□ 1.55
RtcAQ9D7H3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
RtcAQ9D7H3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RtcAQ9D7H3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RtcAQ9D7H3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
RtcAQ9D7H3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RtcAQ9D7H3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
RtcAQ9D7H3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RtcAQ9D7H3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RtcAQ9D7H3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.66■■□□□ 1.54
RtcAQ9D7H3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.66■■□□□ 1.54
RtcAQ9D7H3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RtcAQ9D7H3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RtcAQ9D7H3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RtcAQ9D7H3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RtcAQ9D7H3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
RtcAQ9D7H3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RtcAQ9D7H3 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.64■■□□□ 1.54
RtcAQ9D7H3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RtcAQ9D7H3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RtcAQ9D7H3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
RtcAQ9D7H3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RtcAQ9D7H3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RtcAQ9D7H3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RtcAQ9D7H3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
RtcAQ9D7H3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
RtcAQ9D7H3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RtcAQ9D7H3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RtcAQ9D7H3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RtcAQ9D7H3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.56■■□□□ 1.52
RtcAQ9D7H3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RtcAQ9D7H3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RtcAQ9D7H3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
RtcAQ9D7H3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
RtcAQ9D7H3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RtcAQ9D7H3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RtcAQ9D7H3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RtcAQ9D7H3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
RtcAQ9D7H3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.51■■□□□ 1.51
RtcAQ9D7H3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RtcAQ9D7H3 Gm45855-201ENSMUST00000212546 880 ntBASIC24.5■■□□□ 1.51
RtcAQ9D7H3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RtcAQ9D7H3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.49■■□□□ 1.51
RtcAQ9D7H3 Gm9397-201ENSMUST00000200125 605 ntBASIC24.49■■□□□ 1.51
RtcAQ9D7H3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RtcAQ9D7H3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RtcAQ9D7H3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RtcAQ9D7H3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.48■■□□□ 1.51
RtcAQ9D7H3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
RtcAQ9D7H3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
RtcAQ9D7H3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RtcAQ9D7H3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RtcAQ9D7H3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RtcAQ9D7H3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.44■■□□□ 1.5
RtcAQ9D7H3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RtcAQ9D7H3 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.43■■□□□ 1.5
RtcAQ9D7H3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RtcAQ9D7H3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RtcAQ9D7H3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RtcAQ9D7H3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RtcAQ9D7H3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RtcAQ9D7H3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
RtcAQ9D7H3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RtcAQ9D7H3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RtcAQ9D7H3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
RtcAQ9D7H3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RtcAQ9D7H3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RtcAQ9D7H3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms