Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.42■■□□□ 1.66
Snrnp48Q9D361 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Snrnp48Q9D361 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Snrnp48Q9D361 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Snrnp48Q9D361 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Snrnp48Q9D361 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Snrnp48Q9D361 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Snrnp48Q9D361 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Snrnp48Q9D361 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Snrnp48Q9D361 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Snrnp48Q9D361 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Snrnp48Q9D361 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Snrnp48Q9D361 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Snrnp48Q9D361 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Snrnp48Q9D361 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Snrnp48Q9D361 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Snrnp48Q9D361 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Snrnp48Q9D361 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Snrnp48Q9D361 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Snrnp48Q9D361 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Snrnp48Q9D361 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.27■■□□□ 1.64
Snrnp48Q9D361 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Snrnp48Q9D361 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Snrnp48Q9D361 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Snrnp48Q9D361 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Snrnp48Q9D361 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Snrnp48Q9D361 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Snrnp48Q9D361 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Snrnp48Q9D361 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Snrnp48Q9D361 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Snrnp48Q9D361 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Snrnp48Q9D361 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Snrnp48Q9D361 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.18■■□□□ 1.62
Snrnp48Q9D361 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Snrnp48Q9D361 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.18■■□□□ 1.62
Snrnp48Q9D361 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Snrnp48Q9D361 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Snrnp48Q9D361 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Snrnp48Q9D361 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Snrnp48Q9D361 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
Snrnp48Q9D361 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Snrnp48Q9D361 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Snrnp48Q9D361 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Snrnp48Q9D361 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Snrnp48Q9D361 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Snrnp48Q9D361 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Snrnp48Q9D361 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Snrnp48Q9D361 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Snrnp48Q9D361 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.08■■□□□ 1.61
Snrnp48Q9D361 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Snrnp48Q9D361 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Snrnp48Q9D361 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Snrnp48Q9D361 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.05■■□□□ 1.6
Snrnp48Q9D361 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Snrnp48Q9D361 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Snrnp48Q9D361 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Snrnp48Q9D361 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Snrnp48Q9D361 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Snrnp48Q9D361 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Snrnp48Q9D361 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Snrnp48Q9D361 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Snrnp48Q9D361 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Snrnp48Q9D361 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Snrnp48Q9D361 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Snrnp48Q9D361 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Snrnp48Q9D361 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Snrnp48Q9D361 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Snrnp48Q9D361 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25■■□□□ 1.59
Snrnp48Q9D361 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Snrnp48Q9D361 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Snrnp48Q9D361 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Snrnp48Q9D361 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Snrnp48Q9D361 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Snrnp48Q9D361 Zfp131-205ENSMUST00000223812 663 ntBASIC24.95■■□□□ 1.58
Snrnp48Q9D361 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
Snrnp48Q9D361 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Snrnp48Q9D361 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Snrnp48Q9D361 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Snrnp48Q9D361 Zxda-201ENSMUST00000117281 2621 ntBASIC24.92■■□□□ 1.58
Snrnp48Q9D361 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Snrnp48Q9D361 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Snrnp48Q9D361 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Snrnp48Q9D361 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Snrnp48Q9D361 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Snrnp48Q9D361 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.88■■□□□ 1.57
Snrnp48Q9D361 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Snrnp48Q9D361 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Snrnp48Q9D361 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Snrnp48Q9D361 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Snrnp48Q9D361 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Snrnp48Q9D361 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Snrnp48Q9D361 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Snrnp48Q9D361 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Snrnp48Q9D361 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Snrnp48Q9D361 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Snrnp48Q9D361 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.83■■□□□ 1.57
Snrnp48Q9D361 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Snrnp48Q9D361 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Snrnp48Q9D361 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Snrnp48Q9D361 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms