Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Chaf1bQ9D0N7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Chaf1bQ9D0N7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Chaf1bQ9D0N7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Chaf1bQ9D0N7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Chaf1bQ9D0N7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Chaf1bQ9D0N7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Chaf1bQ9D0N7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Chaf1bQ9D0N7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Chaf1bQ9D0N7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Chaf1bQ9D0N7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Chaf1bQ9D0N7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Chaf1bQ9D0N7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Chaf1bQ9D0N7 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chaf1bQ9D0N7 Gm25262-201ENSMUST00000174934 133 ntBASIC23.42■■□□□ 1.34
Chaf1bQ9D0N7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Chaf1bQ9D0N7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chaf1bQ9D0N7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.4■■□□□ 1.34
Chaf1bQ9D0N7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chaf1bQ9D0N7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chaf1bQ9D0N7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Chaf1bQ9D0N7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.4■■□□□ 1.34
Chaf1bQ9D0N7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Chaf1bQ9D0N7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Chaf1bQ9D0N7 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.38■■□□□ 1.33
Chaf1bQ9D0N7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Chaf1bQ9D0N7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Chaf1bQ9D0N7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.36■■□□□ 1.33
Chaf1bQ9D0N7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chaf1bQ9D0N7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chaf1bQ9D0N7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
Chaf1bQ9D0N7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.34■■□□□ 1.33
Chaf1bQ9D0N7 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Chaf1bQ9D0N7 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Chaf1bQ9D0N7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Chaf1bQ9D0N7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chaf1bQ9D0N7 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Chaf1bQ9D0N7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.32■■□□□ 1.32
Chaf1bQ9D0N7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chaf1bQ9D0N7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Chaf1bQ9D0N7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Chaf1bQ9D0N7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Chaf1bQ9D0N7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chaf1bQ9D0N7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Chaf1bQ9D0N7 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Chaf1bQ9D0N7 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.29■■□□□ 1.32
Chaf1bQ9D0N7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.29■■□□□ 1.32
Chaf1bQ9D0N7 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chaf1bQ9D0N7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Chaf1bQ9D0N7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Chaf1bQ9D0N7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.28■■□□□ 1.32
Chaf1bQ9D0N7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Chaf1bQ9D0N7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Chaf1bQ9D0N7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Chaf1bQ9D0N7 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
Chaf1bQ9D0N7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Chaf1bQ9D0N7 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.24■■□□□ 1.31
Chaf1bQ9D0N7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Chaf1bQ9D0N7 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.24■■□□□ 1.31
Chaf1bQ9D0N7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Chaf1bQ9D0N7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC23.23■■□□□ 1.31
Chaf1bQ9D0N7 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Chaf1bQ9D0N7 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.22■■□□□ 1.31
Chaf1bQ9D0N7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chaf1bQ9D0N7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
Chaf1bQ9D0N7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Chaf1bQ9D0N7 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Chaf1bQ9D0N7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.2■■□□□ 1.3
Chaf1bQ9D0N7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chaf1bQ9D0N7 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chaf1bQ9D0N7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chaf1bQ9D0N7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chaf1bQ9D0N7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Chaf1bQ9D0N7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chaf1bQ9D0N7 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Chaf1bQ9D0N7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Chaf1bQ9D0N7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Chaf1bQ9D0N7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Chaf1bQ9D0N7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Chaf1bQ9D0N7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Chaf1bQ9D0N7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Chaf1bQ9D0N7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chaf1bQ9D0N7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Chaf1bQ9D0N7 Gm27322-201ENSMUST00000184007 104 ntBASIC23.15■■□□□ 1.3
Chaf1bQ9D0N7 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.3
Chaf1bQ9D0N7 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Chaf1bQ9D0N7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Chaf1bQ9D0N7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Chaf1bQ9D0N7 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.11■■□□□ 1.29
Chaf1bQ9D0N7 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.11■■□□□ 1.29
Chaf1bQ9D0N7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chaf1bQ9D0N7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chaf1bQ9D0N7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chaf1bQ9D0N7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Chaf1bQ9D0N7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Chaf1bQ9D0N7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.1■■□□□ 1.29
Chaf1bQ9D0N7 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chaf1bQ9D0N7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Chaf1bQ9D0N7 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.08■■□□□ 1.29
Chaf1bQ9D0N7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms