Protein–RNA interactions for Protein: Q9D0F6

Rfc5, Replication factor C subunit 5, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc5Q9D0F6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26,68■■□□□ 1,86
Rfc5Q9D0F6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26,66■■□□□ 1,86
Rfc5Q9D0F6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26,64■■□□□ 1,86
Rfc5Q9D0F6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26,62■■□□□ 1,85
Rfc5Q9D0F6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26,62■■□□□ 1,85
Rfc5Q9D0F6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26,62■■□□□ 1,85
Rfc5Q9D0F6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26,6■■□□□ 1,85
Rfc5Q9D0F6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26,6■■□□□ 1,85
Rfc5Q9D0F6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26,59■■□□□ 1,85
Rfc5Q9D0F6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Rfc5Q9D0F6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Rfc5Q9D0F6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Rfc5Q9D0F6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26,58■■□□□ 1,85
Rfc5Q9D0F6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26,57■■□□□ 1,84
Rfc5Q9D0F6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26,57■■□□□ 1,84
Rfc5Q9D0F6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26,54■■□□□ 1,84
Rfc5Q9D0F6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26,53■■□□□ 1,84
Rfc5Q9D0F6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Rfc5Q9D0F6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Rfc5Q9D0F6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26,5■■□□□ 1,83
Rfc5Q9D0F6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26,49■■□□□ 1,83
Rfc5Q9D0F6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26,48■■□□□ 1,83
Rfc5Q9D0F6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Rfc5Q9D0F6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26,47■■□□□ 1,83
Rfc5Q9D0F6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Rfc5Q9D0F6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26,45■■□□□ 1,82
Rfc5Q9D0F6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Rfc5Q9D0F6 Gm9397-201ENSMUST00000200125 605 ntBASIC26,43■■□□□ 1,82
Rfc5Q9D0F6 Gm45855-201ENSMUST00000212546 880 ntBASIC26,43■■□□□ 1,82
Rfc5Q9D0F6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Rfc5Q9D0F6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26,42■■□□□ 1,82
Rfc5Q9D0F6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26,4■■□□□ 1,82
Rfc5Q9D0F6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26,4■■□□□ 1,82
Rfc5Q9D0F6 Gm30346-201ENSMUST00000218641 1699 ntBASIC26,4■■□□□ 1,82
Rfc5Q9D0F6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26,39■■□□□ 1,82
Rfc5Q9D0F6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26,38■■□□□ 1,81
Rfc5Q9D0F6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26,38■■□□□ 1,81
Rfc5Q9D0F6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Rfc5Q9D0F6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26,36■■□□□ 1,81
Rfc5Q9D0F6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26,35■■□□□ 1,81
Rfc5Q9D0F6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
Rfc5Q9D0F6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26,33■■□□□ 1,81
Rfc5Q9D0F6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26,32■■□□□ 1,8
Rfc5Q9D0F6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26,32■■□□□ 1,8
Rfc5Q9D0F6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26,32■■□□□ 1,8
Rfc5Q9D0F6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26,31■■□□□ 1,8
Rfc5Q9D0F6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26,31■■□□□ 1,8
Rfc5Q9D0F6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
Rfc5Q9D0F6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
Rfc5Q9D0F6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26,29■■□□□ 1,8
Rfc5Q9D0F6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26,28■■□□□ 1,8
Rfc5Q9D0F6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26,28■■□□□ 1,8
Rfc5Q9D0F6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26,28■■□□□ 1,8
Rfc5Q9D0F6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26,27■■□□□ 1,8
Rfc5Q9D0F6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26,26■■□□□ 1,79
Rfc5Q9D0F6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26,26■■□□□ 1,79
Rfc5Q9D0F6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC26,25■■□□□ 1,79
Rfc5Q9D0F6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26,25■■□□□ 1,79
Rfc5Q9D0F6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26,25■■□□□ 1,79
Rfc5Q9D0F6 Gm24970-201ENSMUST00000175582 82 ntBASIC26,24■■□□□ 1,79
Rfc5Q9D0F6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Rfc5Q9D0F6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26,23■■□□□ 1,79
Rfc5Q9D0F6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26,23■■□□□ 1,79
Rfc5Q9D0F6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26,22■■□□□ 1,79
Rfc5Q9D0F6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26,22■■□□□ 1,79
Rfc5Q9D0F6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26,21■■□□□ 1,79
Rfc5Q9D0F6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26,21■■□□□ 1,79
Rfc5Q9D0F6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26,2■■□□□ 1,79
Rfc5Q9D0F6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26,2■■□□□ 1,78
Rfc5Q9D0F6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26,2■■□□□ 1,78
Rfc5Q9D0F6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26,2■■□□□ 1,78
Rfc5Q9D0F6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26,19■■□□□ 1,78
Rfc5Q9D0F6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26,19■■□□□ 1,78
Rfc5Q9D0F6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26,18■■□□□ 1,78
Rfc5Q9D0F6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26,18■■□□□ 1,78
Rfc5Q9D0F6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26,17■■□□□ 1,78
Rfc5Q9D0F6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26,16■■□□□ 1,78
Rfc5Q9D0F6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26,16■■□□□ 1,78
Rfc5Q9D0F6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26,16■■□□□ 1,78
Rfc5Q9D0F6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26,15■■□□□ 1,78
Rfc5Q9D0F6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26,15■■□□□ 1,78
Rfc5Q9D0F6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26,15■■□□□ 1,78
Rfc5Q9D0F6 Gm43863-201ENSMUST00000203822 1192 ntBASIC26,13■■□□□ 1,77
Rfc5Q9D0F6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26,12■■□□□ 1,77
Rfc5Q9D0F6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26,12■■□□□ 1,77
Rfc5Q9D0F6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26,12■■□□□ 1,77
Rfc5Q9D0F6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26,11■■□□□ 1,77
Rfc5Q9D0F6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26,11■■□□□ 1,77
Rfc5Q9D0F6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26,1■■□□□ 1,77
Rfc5Q9D0F6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26,09■■□□□ 1,77
Rfc5Q9D0F6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26,08■■□□□ 1,77
Rfc5Q9D0F6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Rfc5Q9D0F6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26,07■■□□□ 1,76
Rfc5Q9D0F6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Rfc5Q9D0F6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Rfc5Q9D0F6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26,07■■□□□ 1,76
Rfc5Q9D0F6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Rfc5Q9D0F6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Rfc5Q9D0F6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26,06■■□□□ 1,76
Rfc5Q9D0F6 Gm6345-201ENSMUST00000180378 1691 ntBASIC26,06■■□□□ 1,76
Retrieved 100 of 76,532 protein–RNA pairs in 38,8 ms