Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ssbp3Q9D032 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.05■□□□□ 0.96
Ssbp3Q9D032 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ssbp3Q9D032 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ssbp3Q9D032 Gm45855-201ENSMUST00000212546 880 ntBASIC21.02■□□□□ 0.96
Ssbp3Q9D032 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.01■□□□□ 0.95
Ssbp3Q9D032 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ssbp3Q9D032 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssbp3Q9D032 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ssbp3Q9D032 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ssbp3Q9D032 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssbp3Q9D032 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssbp3Q9D032 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ssbp3Q9D032 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.99■□□□□ 0.95
Ssbp3Q9D032 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssbp3Q9D032 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssbp3Q9D032 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssbp3Q9D032 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ssbp3Q9D032 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ssbp3Q9D032 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssbp3Q9D032 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssbp3Q9D032 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ssbp3Q9D032 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssbp3Q9D032 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssbp3Q9D032 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Ssbp3Q9D032 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ssbp3Q9D032 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ssbp3Q9D032 Gm9397-201ENSMUST00000200125 605 ntBASIC20.94■□□□□ 0.94
Ssbp3Q9D032 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ssbp3Q9D032 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssbp3Q9D032 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.92■□□□□ 0.94
Ssbp3Q9D032 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.92■□□□□ 0.94
Ssbp3Q9D032 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.92■□□□□ 0.94
Ssbp3Q9D032 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ssbp3Q9D032 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.91■□□□□ 0.94
Ssbp3Q9D032 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ssbp3Q9D032 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.9■□□□□ 0.94
Ssbp3Q9D032 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ssbp3Q9D032 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ssbp3Q9D032 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.89■□□□□ 0.93
Ssbp3Q9D032 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ssbp3Q9D032 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ssbp3Q9D032 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssbp3Q9D032 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ssbp3Q9D032 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ssbp3Q9D032 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ssbp3Q9D032 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssbp3Q9D032 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Ssbp3Q9D032 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.83■□□□□ 0.93
Ssbp3Q9D032 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.83■□□□□ 0.93
Ssbp3Q9D032 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ssbp3Q9D032 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ssbp3Q9D032 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssbp3Q9D032 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssbp3Q9D032 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ssbp3Q9D032 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ssbp3Q9D032 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ssbp3Q9D032 Gm24970-201ENSMUST00000175582 82 ntBASIC20.77■□□□□ 0.92
Ssbp3Q9D032 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.77■□□□□ 0.92
Ssbp3Q9D032 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ssbp3Q9D032 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ssbp3Q9D032 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.76■□□□□ 0.91
Ssbp3Q9D032 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ssbp3Q9D032 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Ssbp3Q9D032 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ssbp3Q9D032 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Ssbp3Q9D032 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ssbp3Q9D032 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ssbp3Q9D032 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.73■□□□□ 0.91
Ssbp3Q9D032 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.73■□□□□ 0.91
Ssbp3Q9D032 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ssbp3Q9D032 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ssbp3Q9D032 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.72■□□□□ 0.91
Ssbp3Q9D032 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ssbp3Q9D032 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ssbp3Q9D032 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ssbp3Q9D032 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssbp3Q9D032 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ssbp3Q9D032 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ssbp3Q9D032 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ssbp3Q9D032 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssbp3Q9D032 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ssbp3Q9D032 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssbp3Q9D032 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ssbp3Q9D032 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ssbp3Q9D032 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.66■□□□□ 0.9
Ssbp3Q9D032 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssbp3Q9D032 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssbp3Q9D032 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ssbp3Q9D032 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Ssbp3Q9D032 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ssbp3Q9D032 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ssbp3Q9D032 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ssbp3Q9D032 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.6■□□□□ 0.89
Ssbp3Q9D032 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ssbp3Q9D032 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.6■□□□□ 0.89
Ssbp3Q9D032 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssbp3Q9D032 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ssbp3Q9D032 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ssbp3Q9D032 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms