Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Trim33Q99PP7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Trim33Q99PP7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Trim33Q99PP7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Trim33Q99PP7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.88■■□□□ 1.57
Trim33Q99PP7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim33Q99PP7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Trim33Q99PP7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Trim33Q99PP7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trim33Q99PP7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim33Q99PP7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Trim33Q99PP7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
Trim33Q99PP7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Trim33Q99PP7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim33Q99PP7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Trim33Q99PP7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
Trim33Q99PP7 Zfp131-205ENSMUST00000223812 663 ntBASIC24.77■■□□□ 1.56
Trim33Q99PP7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim33Q99PP7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim33Q99PP7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim33Q99PP7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim33Q99PP7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim33Q99PP7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim33Q99PP7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim33Q99PP7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.74■■□□□ 1.55
Trim33Q99PP7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim33Q99PP7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Trim33Q99PP7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim33Q99PP7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim33Q99PP7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trim33Q99PP7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Trim33Q99PP7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Trim33Q99PP7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.71■■□□□ 1.55
Trim33Q99PP7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim33Q99PP7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Trim33Q99PP7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.7■■□□□ 1.54
Trim33Q99PP7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Trim33Q99PP7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Trim33Q99PP7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim33Q99PP7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim33Q99PP7 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.66■■□□□ 1.54
Trim33Q99PP7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Trim33Q99PP7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim33Q99PP7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim33Q99PP7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Trim33Q99PP7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Trim33Q99PP7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.63■■□□□ 1.53
Trim33Q99PP7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim33Q99PP7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.62■■□□□ 1.53
Trim33Q99PP7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Trim33Q99PP7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim33Q99PP7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.6■■□□□ 1.53
Trim33Q99PP7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim33Q99PP7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim33Q99PP7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim33Q99PP7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Trim33Q99PP7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim33Q99PP7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.56■■□□□ 1.52
Trim33Q99PP7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim33Q99PP7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Trim33Q99PP7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim33Q99PP7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trim33Q99PP7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Trim33Q99PP7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.53■■□□□ 1.52
Trim33Q99PP7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim33Q99PP7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim33Q99PP7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim33Q99PP7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim33Q99PP7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim33Q99PP7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim33Q99PP7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Trim33Q99PP7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
Trim33Q99PP7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim33Q99PP7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Trim33Q99PP7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim33Q99PP7 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.46■■□□□ 1.51
Trim33Q99PP7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Trim33Q99PP7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Trim33Q99PP7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim33Q99PP7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim33Q99PP7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim33Q99PP7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Trim33Q99PP7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.44■■□□□ 1.5
Trim33Q99PP7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim33Q99PP7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim33Q99PP7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.43■■□□□ 1.5
Trim33Q99PP7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trim33Q99PP7 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.43■■□□□ 1.5
Trim33Q99PP7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim33Q99PP7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Trim33Q99PP7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trim33Q99PP7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Trim33Q99PP7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Trim33Q99PP7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trim33Q99PP7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim33Q99PP7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim33Q99PP7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Trim33Q99PP7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Trim33Q99PP7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.35■■□□□ 1.49
Trim33Q99PP7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 7.3 ms