Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.54■■■□□ 2
Cntnap4Q99P47 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.53■■■□□ 2
Cntnap4Q99P47 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Cntnap4Q99P47 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Cntnap4Q99P47 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Cntnap4Q99P47 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Cntnap4Q99P47 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Cntnap4Q99P47 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.48■■□□□ 1.99
Cntnap4Q99P47 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Cntnap4Q99P47 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Cntnap4Q99P47 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.47■■□□□ 1.99
Cntnap4Q99P47 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.47■■□□□ 1.99
Cntnap4Q99P47 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
Cntnap4Q99P47 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Cntnap4Q99P47 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Cntnap4Q99P47 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Cntnap4Q99P47 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Cntnap4Q99P47 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.44■■□□□ 1.98
Cntnap4Q99P47 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.42■■□□□ 1.98
Cntnap4Q99P47 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Cntnap4Q99P47 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Cntnap4Q99P47 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Cntnap4Q99P47 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Cntnap4Q99P47 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Cntnap4Q99P47 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.37■■□□□ 1.97
Cntnap4Q99P47 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC27.36■■□□□ 1.97
Cntnap4Q99P47 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Cntnap4Q99P47 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Cntnap4Q99P47 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cntnap4Q99P47 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cntnap4Q99P47 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Cntnap4Q99P47 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.33■■□□□ 1.97
Cntnap4Q99P47 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.33■■□□□ 1.97
Cntnap4Q99P47 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.33■■□□□ 1.96
Cntnap4Q99P47 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cntnap4Q99P47 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cntnap4Q99P47 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Cntnap4Q99P47 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cntnap4Q99P47 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.3■■□□□ 1.96
Cntnap4Q99P47 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.3■■□□□ 1.96
Cntnap4Q99P47 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cntnap4Q99P47 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Cntnap4Q99P47 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Cntnap4Q99P47 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cntnap4Q99P47 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Cntnap4Q99P47 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Cntnap4Q99P47 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
Cntnap4Q99P47 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cntnap4Q99P47 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Cntnap4Q99P47 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Cntnap4Q99P47 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.25■■□□□ 1.95
Cntnap4Q99P47 Gm24970-201ENSMUST00000175582 82 ntBASIC27.24■■□□□ 1.95
Cntnap4Q99P47 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Cntnap4Q99P47 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Cntnap4Q99P47 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cntnap4Q99P47 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cntnap4Q99P47 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cntnap4Q99P47 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Cntnap4Q99P47 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
Cntnap4Q99P47 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cntnap4Q99P47 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cntnap4Q99P47 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.17■■□□□ 1.94
Cntnap4Q99P47 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cntnap4Q99P47 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cntnap4Q99P47 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cntnap4Q99P47 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cntnap4Q99P47 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
Cntnap4Q99P47 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cntnap4Q99P47 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.1■■□□□ 1.93
Cntnap4Q99P47 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.09■■□□□ 1.93
Cntnap4Q99P47 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cntnap4Q99P47 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.09■■□□□ 1.93
Cntnap4Q99P47 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Cntnap4Q99P47 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cntnap4Q99P47 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Cntnap4Q99P47 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Cntnap4Q99P47 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Cntnap4Q99P47 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Cntnap4Q99P47 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.05■■□□□ 1.92
Cntnap4Q99P47 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cntnap4Q99P47 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Cntnap4Q99P47 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Cntnap4Q99P47 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Cntnap4Q99P47 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Cntnap4Q99P47 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Cntnap4Q99P47 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.01■■□□□ 1.91
Cntnap4Q99P47 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
Cntnap4Q99P47 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27■■□□□ 1.91
Cntnap4Q99P47 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27■■□□□ 1.91
Cntnap4Q99P47 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
Cntnap4Q99P47 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Cntnap4Q99P47 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
Cntnap4Q99P47 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.97■■□□□ 1.91
Cntnap4Q99P47 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.95■■□□□ 1.91
Cntnap4Q99P47 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Cntnap4Q99P47 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Cntnap4Q99P47 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Cntnap4Q99P47 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
Cntnap4Q99P47 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.92■■□□□ 1.9
Cntnap4Q99P47 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms