Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Pcdha2Q91Y17 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.54■■■□□ 2
Pcdha2Q91Y17 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdha2Q91Y17 Zfp131-205ENSMUST00000223812 663 ntBASIC27.53■■■□□ 2
Pcdha2Q91Y17 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.51■■□□□ 1.99
Pcdha2Q91Y17 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
Pcdha2Q91Y17 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Pcdha2Q91Y17 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pcdha2Q91Y17 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdha2Q91Y17 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.48■■□□□ 1.99
Pcdha2Q91Y17 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdha2Q91Y17 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdha2Q91Y17 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Pcdha2Q91Y17 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.46■■□□□ 1.99
Pcdha2Q91Y17 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Pcdha2Q91Y17 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
Pcdha2Q91Y17 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdha2Q91Y17 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdha2Q91Y17 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Pcdha2Q91Y17 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdha2Q91Y17 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.43■■□□□ 1.98
Pcdha2Q91Y17 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdha2Q91Y17 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdha2Q91Y17 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.43■■□□□ 1.98
Pcdha2Q91Y17 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Pcdha2Q91Y17 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pcdha2Q91Y17 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.4■■□□□ 1.98
Pcdha2Q91Y17 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.39■■□□□ 1.97
Pcdha2Q91Y17 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdha2Q91Y17 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
Pcdha2Q91Y17 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdha2Q91Y17 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdha2Q91Y17 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdha2Q91Y17 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdha2Q91Y17 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdha2Q91Y17 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdha2Q91Y17 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.33■■□□□ 1.97
Pcdha2Q91Y17 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdha2Q91Y17 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdha2Q91Y17 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.29■■□□□ 1.96
Pcdha2Q91Y17 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Pcdha2Q91Y17 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pcdha2Q91Y17 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Pcdha2Q91Y17 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pcdha2Q91Y17 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Pcdha2Q91Y17 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.27■■□□□ 1.96
Pcdha2Q91Y17 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Pcdha2Q91Y17 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdha2Q91Y17 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.24■■□□□ 1.95
Pcdha2Q91Y17 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdha2Q91Y17 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.22■■□□□ 1.95
Pcdha2Q91Y17 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdha2Q91Y17 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdha2Q91Y17 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Pcdha2Q91Y17 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdha2Q91Y17 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
Pcdha2Q91Y17 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdha2Q91Y17 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdha2Q91Y17 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdha2Q91Y17 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Pcdha2Q91Y17 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.15■■□□□ 1.94
Pcdha2Q91Y17 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pcdha2Q91Y17 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.15■■□□□ 1.94
Pcdha2Q91Y17 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdha2Q91Y17 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdha2Q91Y17 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdha2Q91Y17 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
Pcdha2Q91Y17 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdha2Q91Y17 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdha2Q91Y17 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.1■■□□□ 1.93
Pcdha2Q91Y17 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdha2Q91Y17 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdha2Q91Y17 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdha2Q91Y17 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.08■■□□□ 1.93
Pcdha2Q91Y17 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Pcdha2Q91Y17 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.07■■□□□ 1.92
Pcdha2Q91Y17 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Pcdha2Q91Y17 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdha2Q91Y17 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdha2Q91Y17 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pcdha2Q91Y17 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pcdha2Q91Y17 Gm9397-201ENSMUST00000200125 605 ntBASIC27.04■■□□□ 1.92
Pcdha2Q91Y17 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdha2Q91Y17 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Pcdha2Q91Y17 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
Pcdha2Q91Y17 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdha2Q91Y17 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdha2Q91Y17 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdha2Q91Y17 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdha2Q91Y17 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.98■■□□□ 1.91
Pcdha2Q91Y17 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
Pcdha2Q91Y17 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Pcdha2Q91Y17 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.96■■□□□ 1.91
Pcdha2Q91Y17 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdha2Q91Y17 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdha2Q91Y17 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdha2Q91Y17 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.94■■□□□ 1.9
Pcdha2Q91Y17 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdha2Q91Y17 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdha2Q91Y17 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 145.6 ms