Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhga9Q91XX9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhga9Q91XX9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhga9Q91XX9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.14■■□□□ 1.62
Pcdhga9Q91XX9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhga9Q91XX9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.14■■□□□ 1.61
Pcdhga9Q91XX9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.13■■□□□ 1.61
Pcdhga9Q91XX9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhga9Q91XX9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhga9Q91XX9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Pcdhga9Q91XX9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhga9Q91XX9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhga9Q91XX9 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.1■■□□□ 1.61
Pcdhga9Q91XX9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhga9Q91XX9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.09■■□□□ 1.61
Pcdhga9Q91XX9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhga9Q91XX9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Pcdhga9Q91XX9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.07■■□□□ 1.6
Pcdhga9Q91XX9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhga9Q91XX9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Pcdhga9Q91XX9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhga9Q91XX9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhga9Q91XX9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhga9Q91XX9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhga9Q91XX9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhga9Q91XX9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhga9Q91XX9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.02■■□□□ 1.6
Pcdhga9Q91XX9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.02■■□□□ 1.6
Pcdhga9Q91XX9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Pcdhga9Q91XX9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhga9Q91XX9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25■■□□□ 1.59
Pcdhga9Q91XX9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhga9Q91XX9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhga9Q91XX9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Pcdhga9Q91XX9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhga9Q91XX9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.96■■□□□ 1.59
Pcdhga9Q91XX9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhga9Q91XX9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.93■■□□□ 1.58
Pcdhga9Q91XX9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhga9Q91XX9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhga9Q91XX9 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.9■■□□□ 1.58
Pcdhga9Q91XX9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Pcdhga9Q91XX9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
Pcdhga9Q91XX9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.88■■□□□ 1.57
Pcdhga9Q91XX9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhga9Q91XX9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.88■■□□□ 1.57
Pcdhga9Q91XX9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhga9Q91XX9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.87■■□□□ 1.57
Pcdhga9Q91XX9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhga9Q91XX9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhga9Q91XX9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhga9Q91XX9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
Pcdhga9Q91XX9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhga9Q91XX9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhga9Q91XX9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhga9Q91XX9 Gm45855-201ENSMUST00000212546 880 ntBASIC24.82■■□□□ 1.56
Pcdhga9Q91XX9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Pcdhga9Q91XX9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhga9Q91XX9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhga9Q91XX9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhga9Q91XX9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhga9Q91XX9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhga9Q91XX9 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.78■■□□□ 1.56
Pcdhga9Q91XX9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhga9Q91XX9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhga9Q91XX9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
Pcdhga9Q91XX9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhga9Q91XX9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
Pcdhga9Q91XX9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.74■■□□□ 1.55
Pcdhga9Q91XX9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhga9Q91XX9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhga9Q91XX9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhga9Q91XX9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
Pcdhga9Q91XX9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhga9Q91XX9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.72■■□□□ 1.55
Pcdhga9Q91XX9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhga9Q91XX9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhga9Q91XX9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga9Q91XX9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga9Q91XX9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga9Q91XX9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga9Q91XX9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.7■■□□□ 1.54
Pcdhga9Q91XX9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhga9Q91XX9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Pcdhga9Q91XX9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhga9Q91XX9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhga9Q91XX9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhga9Q91XX9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Pcdhga9Q91XX9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Pcdhga9Q91XX9 Gm9397-201ENSMUST00000200125 605 ntBASIC24.65■■□□□ 1.54
Pcdhga9Q91XX9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdhga9Q91XX9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhga9Q91XX9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhga9Q91XX9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Pcdhga9Q91XX9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
Pcdhga9Q91XX9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhga9Q91XX9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhga9Q91XX9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.61■■□□□ 1.53
Pcdhga9Q91XX9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.61■■□□□ 1.53
Pcdhga9Q91XX9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms