Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm9397-201ENSMUST00000200125 605 ntBASIC28.92■■■□□ 2.22
Ddx41Q91VN6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Ddx41Q91VN6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ddx41Q91VN6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Ddx41Q91VN6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Ddx41Q91VN6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Ddx41Q91VN6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Ddx41Q91VN6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Ddx41Q91VN6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Ddx41Q91VN6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ddx41Q91VN6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Ddx41Q91VN6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Ddx41Q91VN6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
Ddx41Q91VN6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.85■■■□□ 2.21
Ddx41Q91VN6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ddx41Q91VN6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.84■■■□□ 2.21
Ddx41Q91VN6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.83■■■□□ 2.21
Ddx41Q91VN6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
Ddx41Q91VN6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ddx41Q91VN6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.81■■■□□ 2.2
Ddx41Q91VN6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.8■■■□□ 2.2
Ddx41Q91VN6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.8■■■□□ 2.2
Ddx41Q91VN6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ddx41Q91VN6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Ddx41Q91VN6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ddx41Q91VN6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.78■■■□□ 2.2
Ddx41Q91VN6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.77■■■□□ 2.2
Ddx41Q91VN6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Ddx41Q91VN6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.77■■■□□ 2.2
Ddx41Q91VN6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Ddx41Q91VN6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Ddx41Q91VN6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Ddx41Q91VN6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Ddx41Q91VN6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
Ddx41Q91VN6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Ddx41Q91VN6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Ddx41Q91VN6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ddx41Q91VN6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.7■■■□□ 2.19
Ddx41Q91VN6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.69■■■□□ 2.18
Ddx41Q91VN6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ddx41Q91VN6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Ddx41Q91VN6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Ddx41Q91VN6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.68■■■□□ 2.18
Ddx41Q91VN6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28.67■■■□□ 2.18
Ddx41Q91VN6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Ddx41Q91VN6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Ddx41Q91VN6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
Ddx41Q91VN6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Ddx41Q91VN6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Ddx41Q91VN6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.65■■■□□ 2.18
Ddx41Q91VN6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ddx41Q91VN6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Ddx41Q91VN6 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.62■■■□□ 2.17
Ddx41Q91VN6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Ddx41Q91VN6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ddx41Q91VN6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ddx41Q91VN6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ddx41Q91VN6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ddx41Q91VN6 Gm24970-201ENSMUST00000175582 82 ntBASIC28.6■■■□□ 2.17
Ddx41Q91VN6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28.6■■■□□ 2.17
Ddx41Q91VN6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ddx41Q91VN6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Ddx41Q91VN6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ddx41Q91VN6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ddx41Q91VN6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Ddx41Q91VN6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.56■■■□□ 2.16
Ddx41Q91VN6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
Ddx41Q91VN6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Ddx41Q91VN6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ddx41Q91VN6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ddx41Q91VN6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Ddx41Q91VN6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ddx41Q91VN6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Ddx41Q91VN6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Ddx41Q91VN6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.52■■■□□ 2.16
Ddx41Q91VN6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Ddx41Q91VN6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Ddx41Q91VN6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.5■■■□□ 2.15
Ddx41Q91VN6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Ddx41Q91VN6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
Ddx41Q91VN6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.48■■■□□ 2.15
Ddx41Q91VN6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Ddx41Q91VN6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ddx41Q91VN6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Ddx41Q91VN6 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.46■■■□□ 2.15
Ddx41Q91VN6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Ddx41Q91VN6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ddx41Q91VN6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Ddx41Q91VN6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Ddx41Q91VN6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.45■■■□□ 2.14
Ddx41Q91VN6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Ddx41Q91VN6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ddx41Q91VN6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.43■■■□□ 2.14
Ddx41Q91VN6 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.43■■■□□ 2.14
Ddx41Q91VN6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ddx41Q91VN6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ddx41Q91VN6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ddx41Q91VN6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ddx41Q91VN6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ddx41Q91VN6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms