Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
H1fooQ8VIK3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
H1fooQ8VIK3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.13■□□□□ 0.97
H1fooQ8VIK3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
H1fooQ8VIK3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
H1fooQ8VIK3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
H1fooQ8VIK3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
H1fooQ8VIK3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
H1fooQ8VIK3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
H1fooQ8VIK3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
H1fooQ8VIK3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
H1fooQ8VIK3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
H1fooQ8VIK3 Gm24804-201ENSMUST00000174982 85 ntBASIC21.04■□□□□ 0.96
H1fooQ8VIK3 Zxda-201ENSMUST00000117281 2621 ntBASIC21.03■□□□□ 0.96
H1fooQ8VIK3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
H1fooQ8VIK3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
H1fooQ8VIK3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H1fooQ8VIK3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
H1fooQ8VIK3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
H1fooQ8VIK3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
H1fooQ8VIK3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
H1fooQ8VIK3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
H1fooQ8VIK3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
H1fooQ8VIK3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
H1fooQ8VIK3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
H1fooQ8VIK3 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.96■□□□□ 0.95
H1fooQ8VIK3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
H1fooQ8VIK3 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.96■□□□□ 0.95
H1fooQ8VIK3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H1fooQ8VIK3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
H1fooQ8VIK3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
H1fooQ8VIK3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
H1fooQ8VIK3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
H1fooQ8VIK3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
H1fooQ8VIK3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H1fooQ8VIK3 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.94■□□□□ 0.94
H1fooQ8VIK3 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.94■□□□□ 0.94
H1fooQ8VIK3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
H1fooQ8VIK3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H1fooQ8VIK3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H1fooQ8VIK3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.93■□□□□ 0.94
H1fooQ8VIK3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H1fooQ8VIK3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
H1fooQ8VIK3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
H1fooQ8VIK3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
H1fooQ8VIK3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
H1fooQ8VIK3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H1fooQ8VIK3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
H1fooQ8VIK3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
H1fooQ8VIK3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
H1fooQ8VIK3 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.89■□□□□ 0.93
H1fooQ8VIK3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
H1fooQ8VIK3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H1fooQ8VIK3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H1fooQ8VIK3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H1fooQ8VIK3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
H1fooQ8VIK3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
H1fooQ8VIK3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.87■□□□□ 0.93
H1fooQ8VIK3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.87■□□□□ 0.93
H1fooQ8VIK3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
H1fooQ8VIK3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H1fooQ8VIK3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
H1fooQ8VIK3 Gm16148-201ENSMUST00000119653 893 ntBASIC20.83■□□□□ 0.93
H1fooQ8VIK3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
H1fooQ8VIK3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H1fooQ8VIK3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H1fooQ8VIK3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H1fooQ8VIK3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.81■□□□□ 0.92
H1fooQ8VIK3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H1fooQ8VIK3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
H1fooQ8VIK3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
H1fooQ8VIK3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
H1fooQ8VIK3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
H1fooQ8VIK3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H1fooQ8VIK3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H1fooQ8VIK3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
H1fooQ8VIK3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
H1fooQ8VIK3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
H1fooQ8VIK3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
H1fooQ8VIK3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
H1fooQ8VIK3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
H1fooQ8VIK3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
H1fooQ8VIK3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.7■□□□□ 0.9
H1fooQ8VIK3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H1fooQ8VIK3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
H1fooQ8VIK3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
H1fooQ8VIK3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
H1fooQ8VIK3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.68■□□□□ 0.9
H1fooQ8VIK3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.67■□□□□ 0.9
H1fooQ8VIK3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
H1fooQ8VIK3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
H1fooQ8VIK3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.66■□□□□ 0.9
H1fooQ8VIK3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
H1fooQ8VIK3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.65■□□□□ 0.9
H1fooQ8VIK3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
H1fooQ8VIK3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
H1fooQ8VIK3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
H1fooQ8VIK3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
H1fooQ8VIK3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
H1fooQ8VIK3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms