Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.29■■□□□ 1.64
Vps39Q8R5L3 Zxda-201ENSMUST00000117281 2621 ntBASIC25.28■■□□□ 1.64
Vps39Q8R5L3 Peli2-204ENSMUST00000226513 1320 ntBASIC25.28■■□□□ 1.64
Vps39Q8R5L3 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.26■■□□□ 1.63
Vps39Q8R5L3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Vps39Q8R5L3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
Vps39Q8R5L3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Vps39Q8R5L3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Vps39Q8R5L3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Vps39Q8R5L3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Vps39Q8R5L3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Vps39Q8R5L3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Vps39Q8R5L3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Vps39Q8R5L3 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.2■■□□□ 1.63
Vps39Q8R5L3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Vps39Q8R5L3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Vps39Q8R5L3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Vps39Q8R5L3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Vps39Q8R5L3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Vps39Q8R5L3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Vps39Q8R5L3 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.17■■□□□ 1.62
Vps39Q8R5L3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vps39Q8R5L3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Vps39Q8R5L3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Vps39Q8R5L3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
Vps39Q8R5L3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vps39Q8R5L3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vps39Q8R5L3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.12■■□□□ 1.61
Vps39Q8R5L3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Vps39Q8R5L3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Vps39Q8R5L3 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.11■■□□□ 1.61
Vps39Q8R5L3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Vps39Q8R5L3 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.09■■□□□ 1.61
Vps39Q8R5L3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.07■■□□□ 1.6
Vps39Q8R5L3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vps39Q8R5L3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vps39Q8R5L3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Vps39Q8R5L3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Vps39Q8R5L3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Vps39Q8R5L3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Vps39Q8R5L3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Vps39Q8R5L3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Vps39Q8R5L3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Vps39Q8R5L3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Vps39Q8R5L3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Vps39Q8R5L3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vps39Q8R5L3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vps39Q8R5L3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Vps39Q8R5L3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25■■□□□ 1.59
Vps39Q8R5L3 Gm24804-201ENSMUST00000174982 85 ntBASIC24.99■■□□□ 1.59
Vps39Q8R5L3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Vps39Q8R5L3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.99■■□□□ 1.59
Vps39Q8R5L3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Vps39Q8R5L3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Vps39Q8R5L3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Vps39Q8R5L3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Vps39Q8R5L3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Vps39Q8R5L3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Vps39Q8R5L3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Vps39Q8R5L3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Vps39Q8R5L3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Vps39Q8R5L3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Vps39Q8R5L3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Vps39Q8R5L3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Vps39Q8R5L3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Vps39Q8R5L3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Vps39Q8R5L3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Vps39Q8R5L3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Vps39Q8R5L3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Vps39Q8R5L3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Vps39Q8R5L3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Vps39Q8R5L3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
Vps39Q8R5L3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Vps39Q8R5L3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.89■■□□□ 1.58
Vps39Q8R5L3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Vps39Q8R5L3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Vps39Q8R5L3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Vps39Q8R5L3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Vps39Q8R5L3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
Vps39Q8R5L3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Vps39Q8R5L3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Vps39Q8R5L3 Gm16148-201ENSMUST00000119653 893 ntBASIC24.81■■□□□ 1.56
Vps39Q8R5L3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.8■■□□□ 1.56
Vps39Q8R5L3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.8■■□□□ 1.56
Vps39Q8R5L3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.8■■□□□ 1.56
Vps39Q8R5L3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.8■■□□□ 1.56
Vps39Q8R5L3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.79■■□□□ 1.56
Vps39Q8R5L3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Vps39Q8R5L3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Vps39Q8R5L3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.78■■□□□ 1.56
Vps39Q8R5L3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
Vps39Q8R5L3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Vps39Q8R5L3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Vps39Q8R5L3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Vps39Q8R5L3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Vps39Q8R5L3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Vps39Q8R5L3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Vps39Q8R5L3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Vps39Q8R5L3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Vps39Q8R5L3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms