Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.29■■□□□ 1.64
Vps39Q8R5L3 Zxda-201ENSMUST00000117281 2621 ntBASIC25.28■■□□□ 1.64
Vps39Q8R5L3 Peli2-204ENSMUST00000226513 1320 ntBASIC25.28■■□□□ 1.64
Vps39Q8R5L3 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.26■■□□□ 1.63
Vps39Q8R5L3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Vps39Q8R5L3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
Vps39Q8R5L3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Vps39Q8R5L3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Vps39Q8R5L3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Vps39Q8R5L3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Vps39Q8R5L3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Vps39Q8R5L3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Vps39Q8R5L3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Vps39Q8R5L3 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.2■■□□□ 1.63
Vps39Q8R5L3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Vps39Q8R5L3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Vps39Q8R5L3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Vps39Q8R5L3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Vps39Q8R5L3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Vps39Q8R5L3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Vps39Q8R5L3 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.17■■□□□ 1.62
Vps39Q8R5L3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vps39Q8R5L3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Vps39Q8R5L3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Vps39Q8R5L3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
Vps39Q8R5L3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vps39Q8R5L3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vps39Q8R5L3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.12■■□□□ 1.61
Vps39Q8R5L3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Vps39Q8R5L3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Vps39Q8R5L3 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.11■■□□□ 1.61
Vps39Q8R5L3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Vps39Q8R5L3 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.09■■□□□ 1.61
Vps39Q8R5L3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.07■■□□□ 1.6
Vps39Q8R5L3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vps39Q8R5L3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vps39Q8R5L3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Vps39Q8R5L3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Vps39Q8R5L3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Vps39Q8R5L3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Vps39Q8R5L3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Vps39Q8R5L3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Vps39Q8R5L3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Vps39Q8R5L3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Vps39Q8R5L3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Vps39Q8R5L3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vps39Q8R5L3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vps39Q8R5L3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Vps39Q8R5L3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC25■■□□□ 1.59
Vps39Q8R5L3 Gm24804-201ENSMUST00000174982 85 ntBASIC24.99■■□□□ 1.59
Vps39Q8R5L3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Vps39Q8R5L3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.99■■□□□ 1.59
Vps39Q8R5L3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Vps39Q8R5L3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Vps39Q8R5L3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Vps39Q8R5L3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Vps39Q8R5L3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Vps39Q8R5L3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Vps39Q8R5L3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
Vps39Q8R5L3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Vps39Q8R5L3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Vps39Q8R5L3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Vps39Q8R5L3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Vps39Q8R5L3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Vps39Q8R5L3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Vps39Q8R5L3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Vps39Q8R5L3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Vps39Q8R5L3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Vps39Q8R5L3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Vps39Q8R5L3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Vps39Q8R5L3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Vps39Q8R5L3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
Vps39Q8R5L3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Vps39Q8R5L3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.89■■□□□ 1.58
Vps39Q8R5L3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Vps39Q8R5L3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Vps39Q8R5L3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Vps39Q8R5L3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
Vps39Q8R5L3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
Vps39Q8R5L3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Vps39Q8R5L3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Vps39Q8R5L3 Gm16148-201ENSMUST00000119653 893 ntBASIC24.81■■□□□ 1.56
Vps39Q8R5L3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.8■■□□□ 1.56
Vps39Q8R5L3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.8■■□□□ 1.56
Vps39Q8R5L3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.8■■□□□ 1.56
Vps39Q8R5L3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.8■■□□□ 1.56
Vps39Q8R5L3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.79■■□□□ 1.56
Vps39Q8R5L3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Vps39Q8R5L3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Vps39Q8R5L3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.78■■□□□ 1.56
Vps39Q8R5L3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
Vps39Q8R5L3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Vps39Q8R5L3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Vps39Q8R5L3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Vps39Q8R5L3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Vps39Q8R5L3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Vps39Q8R5L3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Vps39Q8R5L3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Vps39Q8R5L3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Vps39Q8R5L3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms