Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.62■■■□□ 2.33
Pspc1Q8R326 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Pspc1Q8R326 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Pspc1Q8R326 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.61■■■□□ 2.33
Pspc1Q8R326 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Pspc1Q8R326 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Pspc1Q8R326 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.56■■■□□ 2.32
Pspc1Q8R326 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
Pspc1Q8R326 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Pspc1Q8R326 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Pspc1Q8R326 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Pspc1Q8R326 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Pspc1Q8R326 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Pspc1Q8R326 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.51■■■□□ 2.32
Pspc1Q8R326 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.51■■■□□ 2.32
Pspc1Q8R326 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.51■■■□□ 2.31
Pspc1Q8R326 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Pspc1Q8R326 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
Pspc1Q8R326 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
Pspc1Q8R326 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Pspc1Q8R326 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.5■■■□□ 2.31
Pspc1Q8R326 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Pspc1Q8R326 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.49■■■□□ 2.31
Pspc1Q8R326 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.49■■■□□ 2.31
Pspc1Q8R326 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Pspc1Q8R326 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
Pspc1Q8R326 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Pspc1Q8R326 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Pspc1Q8R326 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Pspc1Q8R326 Gm24970-201ENSMUST00000175582 82 ntBASIC29.42■■■□□ 2.3
Pspc1Q8R326 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Pspc1Q8R326 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Pspc1Q8R326 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Pspc1Q8R326 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Pspc1Q8R326 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Pspc1Q8R326 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.4■■■□□ 2.3
Pspc1Q8R326 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Pspc1Q8R326 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
Pspc1Q8R326 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Pspc1Q8R326 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Pspc1Q8R326 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.36■■■□□ 2.29
Pspc1Q8R326 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.35■■■□□ 2.29
Pspc1Q8R326 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
Pspc1Q8R326 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Pspc1Q8R326 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.34■■■□□ 2.29
Pspc1Q8R326 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Pspc1Q8R326 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Pspc1Q8R326 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
Pspc1Q8R326 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Pspc1Q8R326 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Pspc1Q8R326 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Pspc1Q8R326 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Pspc1Q8R326 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
Pspc1Q8R326 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Pspc1Q8R326 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pspc1Q8R326 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pspc1Q8R326 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Pspc1Q8R326 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Pspc1Q8R326 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.23■■■□□ 2.27
Pspc1Q8R326 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Pspc1Q8R326 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pspc1Q8R326 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Pspc1Q8R326 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC29.2■■■□□ 2.26
Pspc1Q8R326 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
Pspc1Q8R326 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Pspc1Q8R326 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
Pspc1Q8R326 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pspc1Q8R326 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pspc1Q8R326 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Pspc1Q8R326 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.16■■■□□ 2.26
Pspc1Q8R326 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Pspc1Q8R326 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Pspc1Q8R326 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pspc1Q8R326 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pspc1Q8R326 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Pspc1Q8R326 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC29.1■■■□□ 2.25
Pspc1Q8R326 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pspc1Q8R326 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Pspc1Q8R326 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Pspc1Q8R326 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Pspc1Q8R326 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.06■■■□□ 2.24
Pspc1Q8R326 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Pspc1Q8R326 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
Pspc1Q8R326 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Pspc1Q8R326 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.03■■■□□ 2.24
Pspc1Q8R326 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.01■■■□□ 2.23
Pspc1Q8R326 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Pspc1Q8R326 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Pspc1Q8R326 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.99■■■□□ 2.23
Pspc1Q8R326 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Pspc1Q8R326 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Pspc1Q8R326 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Pspc1Q8R326 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
Pspc1Q8R326 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
Pspc1Q8R326 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Pspc1Q8R326 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.95■■■□□ 2.23
Pspc1Q8R326 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
Pspc1Q8R326 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.95■■■□□ 2.22
Pspc1Q8R326 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Pspc1Q8R326 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.94■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms