Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24■■□□□ 1.43
Tm6sf2Q8R1J1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tm6sf2Q8R1J1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Tm6sf2Q8R1J1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tm6sf2Q8R1J1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tm6sf2Q8R1J1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Tm6sf2Q8R1J1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tm6sf2Q8R1J1 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.96■■□□□ 1.43
Tm6sf2Q8R1J1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Tm6sf2Q8R1J1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tm6sf2Q8R1J1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Tm6sf2Q8R1J1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Tm6sf2Q8R1J1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tm6sf2Q8R1J1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Tm6sf2Q8R1J1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
Tm6sf2Q8R1J1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Tm6sf2Q8R1J1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Tm6sf2Q8R1J1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Tm6sf2Q8R1J1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tm6sf2Q8R1J1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tm6sf2Q8R1J1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Tm6sf2Q8R1J1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Tm6sf2Q8R1J1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Tm6sf2Q8R1J1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tm6sf2Q8R1J1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Tm6sf2Q8R1J1 Gm45855-201ENSMUST00000212546 880 ntBASIC23.78■■□□□ 1.4
Tm6sf2Q8R1J1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tm6sf2Q8R1J1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tm6sf2Q8R1J1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Tm6sf2Q8R1J1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tm6sf2Q8R1J1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.75■■□□□ 1.39
Tm6sf2Q8R1J1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Tm6sf2Q8R1J1 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.74■■□□□ 1.39
Tm6sf2Q8R1J1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tm6sf2Q8R1J1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tm6sf2Q8R1J1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Tm6sf2Q8R1J1 Gm9397-201ENSMUST00000200125 605 ntBASIC23.73■■□□□ 1.39
Tm6sf2Q8R1J1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.73■■□□□ 1.39
Tm6sf2Q8R1J1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Tm6sf2Q8R1J1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tm6sf2Q8R1J1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.72■■□□□ 1.39
Tm6sf2Q8R1J1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tm6sf2Q8R1J1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.71■■□□□ 1.39
Tm6sf2Q8R1J1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tm6sf2Q8R1J1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tm6sf2Q8R1J1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
Tm6sf2Q8R1J1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Tm6sf2Q8R1J1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tm6sf2Q8R1J1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tm6sf2Q8R1J1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
Tm6sf2Q8R1J1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tm6sf2Q8R1J1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tm6sf2Q8R1J1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.64■■□□□ 1.37
Tm6sf2Q8R1J1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Tm6sf2Q8R1J1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tm6sf2Q8R1J1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.63■■□□□ 1.37
Tm6sf2Q8R1J1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Tm6sf2Q8R1J1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.63■■□□□ 1.37
Tm6sf2Q8R1J1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tm6sf2Q8R1J1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tm6sf2Q8R1J1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Tm6sf2Q8R1J1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tm6sf2Q8R1J1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tm6sf2Q8R1J1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tm6sf2Q8R1J1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Tm6sf2Q8R1J1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tm6sf2Q8R1J1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Tm6sf2Q8R1J1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.59■■□□□ 1.37
Tm6sf2Q8R1J1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tm6sf2Q8R1J1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Tm6sf2Q8R1J1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Tm6sf2Q8R1J1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Tm6sf2Q8R1J1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tm6sf2Q8R1J1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.56■■□□□ 1.36
Tm6sf2Q8R1J1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tm6sf2Q8R1J1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.54■■□□□ 1.36
Tm6sf2Q8R1J1 Gm24970-201ENSMUST00000175582 82 ntBASIC23.53■■□□□ 1.36
Tm6sf2Q8R1J1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Tm6sf2Q8R1J1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tm6sf2Q8R1J1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.52■■□□□ 1.36
Tm6sf2Q8R1J1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
Tm6sf2Q8R1J1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Tm6sf2Q8R1J1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tm6sf2Q8R1J1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Tm6sf2Q8R1J1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Tm6sf2Q8R1J1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Tm6sf2Q8R1J1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Tm6sf2Q8R1J1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tm6sf2Q8R1J1 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.48■■□□□ 1.35
Tm6sf2Q8R1J1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tm6sf2Q8R1J1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.47■■□□□ 1.35
Tm6sf2Q8R1J1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tm6sf2Q8R1J1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tm6sf2Q8R1J1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Tm6sf2Q8R1J1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tm6sf2Q8R1J1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Tm6sf2Q8R1J1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Tm6sf2Q8R1J1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.45■■□□□ 1.34
Tm6sf2Q8R1J1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tm6sf2Q8R1J1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.44■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms