Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24■■□□□ 1.43
Tm6sf2Q8R1J1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tm6sf2Q8R1J1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Tm6sf2Q8R1J1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tm6sf2Q8R1J1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tm6sf2Q8R1J1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Tm6sf2Q8R1J1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tm6sf2Q8R1J1 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.96■■□□□ 1.43
Tm6sf2Q8R1J1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Tm6sf2Q8R1J1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tm6sf2Q8R1J1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Tm6sf2Q8R1J1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Tm6sf2Q8R1J1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Tm6sf2Q8R1J1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Tm6sf2Q8R1J1 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
Tm6sf2Q8R1J1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Tm6sf2Q8R1J1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
Tm6sf2Q8R1J1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Tm6sf2Q8R1J1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Tm6sf2Q8R1J1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Tm6sf2Q8R1J1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Tm6sf2Q8R1J1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Tm6sf2Q8R1J1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Tm6sf2Q8R1J1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Tm6sf2Q8R1J1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Tm6sf2Q8R1J1 Gm45855-201ENSMUST00000212546 880 ntBASIC23.78■■□□□ 1.4
Tm6sf2Q8R1J1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tm6sf2Q8R1J1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tm6sf2Q8R1J1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Tm6sf2Q8R1J1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tm6sf2Q8R1J1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.75■■□□□ 1.39
Tm6sf2Q8R1J1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Tm6sf2Q8R1J1 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.74■■□□□ 1.39
Tm6sf2Q8R1J1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tm6sf2Q8R1J1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tm6sf2Q8R1J1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Tm6sf2Q8R1J1 Gm9397-201ENSMUST00000200125 605 ntBASIC23.73■■□□□ 1.39
Tm6sf2Q8R1J1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.73■■□□□ 1.39
Tm6sf2Q8R1J1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Tm6sf2Q8R1J1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tm6sf2Q8R1J1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.72■■□□□ 1.39
Tm6sf2Q8R1J1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tm6sf2Q8R1J1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.71■■□□□ 1.39
Tm6sf2Q8R1J1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tm6sf2Q8R1J1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tm6sf2Q8R1J1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
Tm6sf2Q8R1J1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Tm6sf2Q8R1J1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tm6sf2Q8R1J1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tm6sf2Q8R1J1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
Tm6sf2Q8R1J1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tm6sf2Q8R1J1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tm6sf2Q8R1J1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.64■■□□□ 1.37
Tm6sf2Q8R1J1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Tm6sf2Q8R1J1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tm6sf2Q8R1J1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.63■■□□□ 1.37
Tm6sf2Q8R1J1 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Tm6sf2Q8R1J1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.63■■□□□ 1.37
Tm6sf2Q8R1J1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tm6sf2Q8R1J1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Tm6sf2Q8R1J1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Tm6sf2Q8R1J1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tm6sf2Q8R1J1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tm6sf2Q8R1J1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tm6sf2Q8R1J1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Tm6sf2Q8R1J1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tm6sf2Q8R1J1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Tm6sf2Q8R1J1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.59■■□□□ 1.37
Tm6sf2Q8R1J1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tm6sf2Q8R1J1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Tm6sf2Q8R1J1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Tm6sf2Q8R1J1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Tm6sf2Q8R1J1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tm6sf2Q8R1J1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.56■■□□□ 1.36
Tm6sf2Q8R1J1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tm6sf2Q8R1J1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.54■■□□□ 1.36
Tm6sf2Q8R1J1 Gm24970-201ENSMUST00000175582 82 ntBASIC23.53■■□□□ 1.36
Tm6sf2Q8R1J1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Tm6sf2Q8R1J1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tm6sf2Q8R1J1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.52■■□□□ 1.36
Tm6sf2Q8R1J1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
Tm6sf2Q8R1J1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Tm6sf2Q8R1J1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tm6sf2Q8R1J1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Tm6sf2Q8R1J1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Tm6sf2Q8R1J1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Tm6sf2Q8R1J1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Tm6sf2Q8R1J1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tm6sf2Q8R1J1 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.48■■□□□ 1.35
Tm6sf2Q8R1J1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tm6sf2Q8R1J1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.47■■□□□ 1.35
Tm6sf2Q8R1J1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tm6sf2Q8R1J1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tm6sf2Q8R1J1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Tm6sf2Q8R1J1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tm6sf2Q8R1J1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Tm6sf2Q8R1J1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Tm6sf2Q8R1J1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.45■■□□□ 1.34
Tm6sf2Q8R1J1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tm6sf2Q8R1J1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.44■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms