Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Trnt1Q8K1J6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trnt1Q8K1J6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Trnt1Q8K1J6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trnt1Q8K1J6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Trnt1Q8K1J6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.59■■□□□ 1.53
Trnt1Q8K1J6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Trnt1Q8K1J6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trnt1Q8K1J6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Trnt1Q8K1J6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trnt1Q8K1J6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trnt1Q8K1J6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Trnt1Q8K1J6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trnt1Q8K1J6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trnt1Q8K1J6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Trnt1Q8K1J6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trnt1Q8K1J6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trnt1Q8K1J6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Trnt1Q8K1J6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Trnt1Q8K1J6 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.53■■□□□ 1.52
Trnt1Q8K1J6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Trnt1Q8K1J6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trnt1Q8K1J6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Trnt1Q8K1J6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Trnt1Q8K1J6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.5■■□□□ 1.51
Trnt1Q8K1J6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24.5■■□□□ 1.51
Trnt1Q8K1J6 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.5■■□□□ 1.51
Trnt1Q8K1J6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trnt1Q8K1J6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trnt1Q8K1J6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Trnt1Q8K1J6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Trnt1Q8K1J6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trnt1Q8K1J6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Trnt1Q8K1J6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
Trnt1Q8K1J6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Trnt1Q8K1J6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trnt1Q8K1J6 Gm16148-201ENSMUST00000119653 893 ntBASIC24.45■■□□□ 1.5
Trnt1Q8K1J6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trnt1Q8K1J6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trnt1Q8K1J6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Trnt1Q8K1J6 Zxda-201ENSMUST00000117281 2621 ntBASIC24.43■■□□□ 1.5
Trnt1Q8K1J6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trnt1Q8K1J6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trnt1Q8K1J6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Trnt1Q8K1J6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trnt1Q8K1J6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.39■■□□□ 1.49
Trnt1Q8K1J6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Trnt1Q8K1J6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trnt1Q8K1J6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Trnt1Q8K1J6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trnt1Q8K1J6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trnt1Q8K1J6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trnt1Q8K1J6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trnt1Q8K1J6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Trnt1Q8K1J6 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.33■■□□□ 1.49
Trnt1Q8K1J6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Trnt1Q8K1J6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trnt1Q8K1J6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Trnt1Q8K1J6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trnt1Q8K1J6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Trnt1Q8K1J6 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.29■■□□□ 1.48
Trnt1Q8K1J6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Trnt1Q8K1J6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Trnt1Q8K1J6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Trnt1Q8K1J6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Trnt1Q8K1J6 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.26■■□□□ 1.47
Trnt1Q8K1J6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Trnt1Q8K1J6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.23■■□□□ 1.47
Trnt1Q8K1J6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
Trnt1Q8K1J6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Trnt1Q8K1J6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Trnt1Q8K1J6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Trnt1Q8K1J6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Trnt1Q8K1J6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trnt1Q8K1J6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Trnt1Q8K1J6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Trnt1Q8K1J6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Trnt1Q8K1J6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Trnt1Q8K1J6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trnt1Q8K1J6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Trnt1Q8K1J6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trnt1Q8K1J6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Trnt1Q8K1J6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
Trnt1Q8K1J6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Trnt1Q8K1J6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Trnt1Q8K1J6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Trnt1Q8K1J6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Trnt1Q8K1J6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Trnt1Q8K1J6 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trnt1Q8K1J6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trnt1Q8K1J6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Trnt1Q8K1J6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Trnt1Q8K1J6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Trnt1Q8K1J6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Trnt1Q8K1J6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.08■■□□□ 1.45
Trnt1Q8K1J6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Trnt1Q8K1J6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Trnt1Q8K1J6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Trnt1Q8K1J6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.07■■□□□ 1.44
Trnt1Q8K1J6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.07■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms