Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rtn1Q8K0T0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29.53■■■□□ 2.32
Rtn1Q8K0T0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rtn1Q8K0T0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rtn1Q8K0T0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.51■■■□□ 2.31
Rtn1Q8K0T0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rtn1Q8K0T0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.5■■■□□ 2.31
Rtn1Q8K0T0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Rtn1Q8K0T0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Rtn1Q8K0T0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
Rtn1Q8K0T0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Rtn1Q8K0T0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.45■■■□□ 2.3
Rtn1Q8K0T0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rtn1Q8K0T0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rtn1Q8K0T0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rtn1Q8K0T0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rtn1Q8K0T0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
Rtn1Q8K0T0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Rtn1Q8K0T0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Rtn1Q8K0T0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Rtn1Q8K0T0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Rtn1Q8K0T0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
Rtn1Q8K0T0 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.37■■■□□ 2.29
Rtn1Q8K0T0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
Rtn1Q8K0T0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Rtn1Q8K0T0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC29.34■■■□□ 2.29
Rtn1Q8K0T0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.33■■■□□ 2.29
Rtn1Q8K0T0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Rtn1Q8K0T0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Rtn1Q8K0T0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Rtn1Q8K0T0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Rtn1Q8K0T0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
Rtn1Q8K0T0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Rtn1Q8K0T0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Rtn1Q8K0T0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
Rtn1Q8K0T0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Rtn1Q8K0T0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Rtn1Q8K0T0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rtn1Q8K0T0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Rtn1Q8K0T0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Rtn1Q8K0T0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Rtn1Q8K0T0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rtn1Q8K0T0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
Rtn1Q8K0T0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rtn1Q8K0T0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.21■■■□□ 2.27
Rtn1Q8K0T0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rtn1Q8K0T0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.2■■■□□ 2.27
Rtn1Q8K0T0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
Rtn1Q8K0T0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.2■■■□□ 2.26
Rtn1Q8K0T0 Zfp131-205ENSMUST00000223812 663 ntBASIC29.19■■■□□ 2.26
Rtn1Q8K0T0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rtn1Q8K0T0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Rtn1Q8K0T0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Rtn1Q8K0T0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtn1Q8K0T0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtn1Q8K0T0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtn1Q8K0T0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rtn1Q8K0T0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Rtn1Q8K0T0 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.15■■■□□ 2.26
Rtn1Q8K0T0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Rtn1Q8K0T0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Rtn1Q8K0T0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Rtn1Q8K0T0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.09■■■□□ 2.25
Rtn1Q8K0T0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
Rtn1Q8K0T0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Rtn1Q8K0T0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Rtn1Q8K0T0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rtn1Q8K0T0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Rtn1Q8K0T0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Rtn1Q8K0T0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Rtn1Q8K0T0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Rtn1Q8K0T0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Rtn1Q8K0T0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.02■■■□□ 2.24
Rtn1Q8K0T0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Rtn1Q8K0T0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
Rtn1Q8K0T0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Rtn1Q8K0T0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29■■■□□ 2.23
Rtn1Q8K0T0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.99■■■□□ 2.23
Rtn1Q8K0T0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Rtn1Q8K0T0 Zxda-201ENSMUST00000117281 2621 ntBASIC28.99■■■□□ 2.23
Rtn1Q8K0T0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Rtn1Q8K0T0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Rtn1Q8K0T0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Rtn1Q8K0T0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Rtn1Q8K0T0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.96■■■□□ 2.23
Rtn1Q8K0T0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Rtn1Q8K0T0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Rtn1Q8K0T0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.93■■■□□ 2.22
Rtn1Q8K0T0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Rtn1Q8K0T0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Rtn1Q8K0T0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Rtn1Q8K0T0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Rtn1Q8K0T0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Rtn1Q8K0T0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
Rtn1Q8K0T0 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.86■■■□□ 2.21
Rtn1Q8K0T0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Rtn1Q8K0T0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Rtn1Q8K0T0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Rtn1Q8K0T0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Rtn1Q8K0T0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms