Protein–RNA interactions for Protein: Q8CGP1

Hist1h2bk, Histone H2B type 1-K, mousemouse

Known RBP Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2bkQ8CGP1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist1h2bkQ8CGP1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Hist1h2bkQ8CGP1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hist1h2bkQ8CGP1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hist1h2bkQ8CGP1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hist1h2bkQ8CGP1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hist1h2bkQ8CGP1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Hist1h2bkQ8CGP1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h2bkQ8CGP1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hist1h2bkQ8CGP1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hist1h2bkQ8CGP1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h2bkQ8CGP1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hist1h2bkQ8CGP1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hist1h2bkQ8CGP1 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.23■□□□□ 0.67
Hist1h2bkQ8CGP1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hist1h2bkQ8CGP1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hist1h2bkQ8CGP1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hist1h2bkQ8CGP1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hist1h2bkQ8CGP1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hist1h2bkQ8CGP1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.2■□□□□ 0.66
Hist1h2bkQ8CGP1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hist1h2bkQ8CGP1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hist1h2bkQ8CGP1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hist1h2bkQ8CGP1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hist1h2bkQ8CGP1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hist1h2bkQ8CGP1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hist1h2bkQ8CGP1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hist1h2bkQ8CGP1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hist1h2bkQ8CGP1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.14■□□□□ 0.65
Hist1h2bkQ8CGP1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hist1h2bkQ8CGP1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Hist1h2bkQ8CGP1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hist1h2bkQ8CGP1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hist1h2bkQ8CGP1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hist1h2bkQ8CGP1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.11■□□□□ 0.65
Hist1h2bkQ8CGP1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Hist1h2bkQ8CGP1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hist1h2bkQ8CGP1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Hist1h2bkQ8CGP1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hist1h2bkQ8CGP1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hist1h2bkQ8CGP1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hist1h2bkQ8CGP1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hist1h2bkQ8CGP1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Hist1h2bkQ8CGP1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hist1h2bkQ8CGP1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hist1h2bkQ8CGP1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.07■□□□□ 0.64
Hist1h2bkQ8CGP1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Hist1h2bkQ8CGP1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hist1h2bkQ8CGP1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hist1h2bkQ8CGP1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hist1h2bkQ8CGP1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Hist1h2bkQ8CGP1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Hist1h2bkQ8CGP1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hist1h2bkQ8CGP1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hist1h2bkQ8CGP1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hist1h2bkQ8CGP1 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.03■□□□□ 0.64
Hist1h2bkQ8CGP1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Hist1h2bkQ8CGP1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hist1h2bkQ8CGP1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hist1h2bkQ8CGP1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hist1h2bkQ8CGP1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hist1h2bkQ8CGP1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hist1h2bkQ8CGP1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Hist1h2bkQ8CGP1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
Hist1h2bkQ8CGP1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hist1h2bkQ8CGP1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hist1h2bkQ8CGP1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hist1h2bkQ8CGP1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.98■□□□□ 0.63
Hist1h2bkQ8CGP1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hist1h2bkQ8CGP1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hist1h2bkQ8CGP1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hist1h2bkQ8CGP1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hist1h2bkQ8CGP1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h2bkQ8CGP1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h2bkQ8CGP1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hist1h2bkQ8CGP1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Hist1h2bkQ8CGP1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hist1h2bkQ8CGP1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Hist1h2bkQ8CGP1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Hist1h2bkQ8CGP1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hist1h2bkQ8CGP1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hist1h2bkQ8CGP1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Hist1h2bkQ8CGP1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h2bkQ8CGP1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hist1h2bkQ8CGP1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hist1h2bkQ8CGP1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h2bkQ8CGP1 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.89■□□□□ 0.61
Hist1h2bkQ8CGP1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h2bkQ8CGP1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hist1h2bkQ8CGP1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h2bkQ8CGP1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h2bkQ8CGP1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hist1h2bkQ8CGP1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hist1h2bkQ8CGP1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h2bkQ8CGP1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.86■□□□□ 0.61
Hist1h2bkQ8CGP1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h2bkQ8CGP1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Hist1h2bkQ8CGP1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.86■□□□□ 0.61
Hist1h2bkQ8CGP1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hist1h2bkQ8CGP1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 7.1 ms