Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Trim52Q8CDV4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Trim52Q8CDV4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC32.46■■■□□ 2.79
Trim52Q8CDV4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC32.45■■■□□ 2.78
Trim52Q8CDV4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Trim52Q8CDV4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Trim52Q8CDV4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Trim52Q8CDV4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
Trim52Q8CDV4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Trim52Q8CDV4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32.41■■■□□ 2.78
Trim52Q8CDV4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Trim52Q8CDV4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Trim52Q8CDV4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Trim52Q8CDV4 Gm24970-201ENSMUST00000175582 82 ntBASIC32.39■■■□□ 2.78
Trim52Q8CDV4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Trim52Q8CDV4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Trim52Q8CDV4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Trim52Q8CDV4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Trim52Q8CDV4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC32.37■■■□□ 2.77
Trim52Q8CDV4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Trim52Q8CDV4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Trim52Q8CDV4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Trim52Q8CDV4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Trim52Q8CDV4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Trim52Q8CDV4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Trim52Q8CDV4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Trim52Q8CDV4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Trim52Q8CDV4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC32.31■■■□□ 2.76
Trim52Q8CDV4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
Trim52Q8CDV4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Trim52Q8CDV4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.28■■■□□ 2.76
Trim52Q8CDV4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Trim52Q8CDV4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC32.27■■■□□ 2.76
Trim52Q8CDV4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
Trim52Q8CDV4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC32.27■■■□□ 2.76
Trim52Q8CDV4 Gm2415-204ENSMUST00000190235 2004 ntBASIC32.27■■■□□ 2.76
Trim52Q8CDV4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC32.26■■■□□ 2.76
Trim52Q8CDV4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
Trim52Q8CDV4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
Trim52Q8CDV4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Trim52Q8CDV4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Trim52Q8CDV4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Trim52Q8CDV4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Trim52Q8CDV4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Trim52Q8CDV4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC32.17■■■□□ 2.74
Trim52Q8CDV4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Trim52Q8CDV4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC32.16■■■□□ 2.74
Trim52Q8CDV4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Trim52Q8CDV4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
Trim52Q8CDV4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Trim52Q8CDV4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Trim52Q8CDV4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Trim52Q8CDV4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Trim52Q8CDV4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Trim52Q8CDV4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Trim52Q8CDV4 Gm43863-201ENSMUST00000203822 1192 ntBASIC32.08■■■□□ 2.73
Trim52Q8CDV4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Trim52Q8CDV4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
Trim52Q8CDV4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Trim52Q8CDV4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Trim52Q8CDV4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Trim52Q8CDV4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
Trim52Q8CDV4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Trim52Q8CDV4 Gm6658-202ENSMUST00000209493 1885 ntBASIC32■■■□□ 2.71
Trim52Q8CDV4 Gm30346-201ENSMUST00000218641 1699 ntBASIC32■■■□□ 2.71
Trim52Q8CDV4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32■■■□□ 2.71
Trim52Q8CDV4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Trim52Q8CDV4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Trim52Q8CDV4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Trim52Q8CDV4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC31.95■■■□□ 2.71
Trim52Q8CDV4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Trim52Q8CDV4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
Trim52Q8CDV4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.93■■■□□ 2.7
Trim52Q8CDV4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.89■■■□□ 2.7
Trim52Q8CDV4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Trim52Q8CDV4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Trim52Q8CDV4 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.87■■■□□ 2.69
Trim52Q8CDV4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Trim52Q8CDV4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Trim52Q8CDV4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Trim52Q8CDV4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Trim52Q8CDV4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Trim52Q8CDV4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
Trim52Q8CDV4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
Trim52Q8CDV4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Trim52Q8CDV4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Trim52Q8CDV4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Trim52Q8CDV4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Trim52Q8CDV4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.8■■■□□ 2.68
Trim52Q8CDV4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Trim52Q8CDV4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Trim52Q8CDV4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Trim52Q8CDV4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
Trim52Q8CDV4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.76■■■□□ 2.67
Trim52Q8CDV4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Trim52Q8CDV4 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.75■■■□□ 2.67
Trim52Q8CDV4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Trim52Q8CDV4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
Trim52Q8CDV4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Trim52Q8CDV4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms