Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32,47■■■□□ 2,79
Trim52Q8CDV4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32,46■■■□□ 2,79
Trim52Q8CDV4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC32,46■■■□□ 2,79
Trim52Q8CDV4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC32,45■■■□□ 2,78
Trim52Q8CDV4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC32,44■■■□□ 2,78
Trim52Q8CDV4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32,44■■■□□ 2,78
Trim52Q8CDV4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC32,43■■■□□ 2,78
Trim52Q8CDV4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC32,43■■■□□ 2,78
Trim52Q8CDV4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32,43■■■□□ 2,78
Trim52Q8CDV4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32,41■■■□□ 2,78
Trim52Q8CDV4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32,41■■■□□ 2,78
Trim52Q8CDV4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32,41■■■□□ 2,78
Trim52Q8CDV4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32,39■■■□□ 2,78
Trim52Q8CDV4 Gm24970-201ENSMUST00000175582 82 ntBASIC32,39■■■□□ 2,78
Trim52Q8CDV4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC32,39■■■□□ 2,78
Trim52Q8CDV4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32,38■■■□□ 2,77
Trim52Q8CDV4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32,38■■■□□ 2,77
Trim52Q8CDV4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32,38■■■□□ 2,77
Trim52Q8CDV4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC32,37■■■□□ 2,77
Trim52Q8CDV4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC32,37■■■□□ 2,77
Trim52Q8CDV4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32,37■■■□□ 2,77
Trim52Q8CDV4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC32,36■■■□□ 2,77
Trim52Q8CDV4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC32,36■■■□□ 2,77
Trim52Q8CDV4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC32,31■■■□□ 2,76
Trim52Q8CDV4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32,31■■■□□ 2,76
Trim52Q8CDV4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32,31■■■□□ 2,76
Trim52Q8CDV4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC32,31■■■□□ 2,76
Trim52Q8CDV4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC32,31■■■□□ 2,76
Trim52Q8CDV4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC32,31■■■□□ 2,76
Trim52Q8CDV4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC32,29■■■□□ 2,76
Trim52Q8CDV4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32,28■■■□□ 2,76
Trim52Q8CDV4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32,27■■■□□ 2,76
Trim52Q8CDV4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC32,27■■■□□ 2,76
Trim52Q8CDV4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC32,27■■■□□ 2,76
Trim52Q8CDV4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC32,27■■■□□ 2,76
Trim52Q8CDV4 Gm2415-204ENSMUST00000190235 2004 ntBASIC32,27■■■□□ 2,76
Trim52Q8CDV4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC32,26■■■□□ 2,76
Trim52Q8CDV4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC32,26■■■□□ 2,75
Trim52Q8CDV4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC32,22■■■□□ 2,75
Trim52Q8CDV4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC32,21■■■□□ 2,75
Trim52Q8CDV4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC32,21■■■□□ 2,75
Trim52Q8CDV4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32,2■■■□□ 2,75
Trim52Q8CDV4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC32,2■■■□□ 2,75
Trim52Q8CDV4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32,19■■■□□ 2,74
Trim52Q8CDV4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC32,17■■■□□ 2,74
Trim52Q8CDV4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC32,16■■■□□ 2,74
Trim52Q8CDV4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC32,16■■■□□ 2,74
Trim52Q8CDV4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32,16■■■□□ 2,74
Trim52Q8CDV4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32,15■■■□□ 2,74
Trim52Q8CDV4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32,13■■■□□ 2,73
Trim52Q8CDV4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC32,12■■■□□ 2,73
Trim52Q8CDV4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC32,12■■■□□ 2,73
Trim52Q8CDV4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC32,09■■■□□ 2,73
Trim52Q8CDV4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32,08■■■□□ 2,73
Trim52Q8CDV4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC32,08■■■□□ 2,73
Trim52Q8CDV4 Gm43863-201ENSMUST00000203822 1192 ntBASIC32,08■■■□□ 2,73
Trim52Q8CDV4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32,08■■■□□ 2,73
Trim52Q8CDV4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC32,07■■■□□ 2,72
Trim52Q8CDV4 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC32,07■■■□□ 2,72
Trim52Q8CDV4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC32,05■■■□□ 2,72
Trim52Q8CDV4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32,05■■■□□ 2,72
Trim52Q8CDV4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32,04■■■□□ 2,72
Trim52Q8CDV4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC32,02■■■□□ 2,72
Trim52Q8CDV4 Gm6658-202ENSMUST00000209493 1885 ntBASIC32■■■□□ 2,71
Trim52Q8CDV4 Gm30346-201ENSMUST00000218641 1699 ntBASIC32■■■□□ 2,71
Trim52Q8CDV4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32■■■□□ 2,71
Trim52Q8CDV4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31,99■■■□□ 2,71
Trim52Q8CDV4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31,96■■■□□ 2,71
Trim52Q8CDV4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31,96■■■□□ 2,71
Trim52Q8CDV4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC31,95■■■□□ 2,71
Trim52Q8CDV4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31,94■■■□□ 2,7
Trim52Q8CDV4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31,93■■■□□ 2,7
Trim52Q8CDV4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31,93■■■□□ 2,7
Trim52Q8CDV4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31,89■■■□□ 2,7
Trim52Q8CDV4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31,89■■■□□ 2,7
Trim52Q8CDV4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31,87■■■□□ 2,69
Trim52Q8CDV4 AC157572.2-201ENSMUST00000226970 908 ntBASIC31,87■■■□□ 2,69
Trim52Q8CDV4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31,87■■■□□ 2,69
Trim52Q8CDV4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31,86■■■□□ 2,69
Trim52Q8CDV4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31,86■■■□□ 2,69
Trim52Q8CDV4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31,85■■■□□ 2,69
Trim52Q8CDV4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31,85■■■□□ 2,69
Trim52Q8CDV4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31,83■■■□□ 2,69
Trim52Q8CDV4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31,82■■■□□ 2,69
Trim52Q8CDV4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31,81■■■□□ 2,68
Trim52Q8CDV4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31,81■■■□□ 2,68
Trim52Q8CDV4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31,81■■■□□ 2,68
Trim52Q8CDV4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31,8■■■□□ 2,68
Trim52Q8CDV4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31,8■■■□□ 2,68
Trim52Q8CDV4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31,79■■■□□ 2,68
Trim52Q8CDV4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31,79■■■□□ 2,68
Trim52Q8CDV4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31,78■■■□□ 2,68
Trim52Q8CDV4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31,77■■■□□ 2,68
Trim52Q8CDV4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31,76■■■□□ 2,67
Trim52Q8CDV4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31,76■■■□□ 2,67
Trim52Q8CDV4 Gm9939-201ENSMUST00000067161 1154 ntBASIC31,75■■■□□ 2,67
Trim52Q8CDV4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31,73■■■□□ 2,67
Trim52Q8CDV4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31,72■■■□□ 2,67
Trim52Q8CDV4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31,72■■■□□ 2,67
Trim52Q8CDV4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31,71■■■□□ 2,67
Retrieved 100 of 76,532 protein–RNA pairs in 9,2 ms