Protein–RNA interactions for Protein: Q8CAE3

Kcnmb1, Calcium-activated potassium channel subunit beta-1, mousemouse

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnmb1Q8CAE3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Kcnmb1Q8CAE3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Kcnmb1Q8CAE3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Kcnmb1Q8CAE3 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.34■■□□□ 1.33
Kcnmb1Q8CAE3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.34■■□□□ 1.33
Kcnmb1Q8CAE3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Kcnmb1Q8CAE3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.33■■□□□ 1.33
Kcnmb1Q8CAE3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.31■■□□□ 1.32
Kcnmb1Q8CAE3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Kcnmb1Q8CAE3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Kcnmb1Q8CAE3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Kcnmb1Q8CAE3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Kcnmb1Q8CAE3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Kcnmb1Q8CAE3 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.28■■□□□ 1.32
Kcnmb1Q8CAE3 Peli2-204ENSMUST00000226513 1320 ntBASIC23.28■■□□□ 1.32
Kcnmb1Q8CAE3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Kcnmb1Q8CAE3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Kcnmb1Q8CAE3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Kcnmb1Q8CAE3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Kcnmb1Q8CAE3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Kcnmb1Q8CAE3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Kcnmb1Q8CAE3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Kcnmb1Q8CAE3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Kcnmb1Q8CAE3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Kcnmb1Q8CAE3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kcnmb1Q8CAE3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Kcnmb1Q8CAE3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kcnmb1Q8CAE3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Kcnmb1Q8CAE3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Kcnmb1Q8CAE3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Kcnmb1Q8CAE3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Kcnmb1Q8CAE3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Kcnmb1Q8CAE3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Kcnmb1Q8CAE3 Gm30346-201ENSMUST00000218641 1699 ntBASIC23.18■■□□□ 1.3
Kcnmb1Q8CAE3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Kcnmb1Q8CAE3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Kcnmb1Q8CAE3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Kcnmb1Q8CAE3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Kcnmb1Q8CAE3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Kcnmb1Q8CAE3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Kcnmb1Q8CAE3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Kcnmb1Q8CAE3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.13■■□□□ 1.29
Kcnmb1Q8CAE3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Kcnmb1Q8CAE3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Kcnmb1Q8CAE3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.11■■□□□ 1.29
Kcnmb1Q8CAE3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Kcnmb1Q8CAE3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Kcnmb1Q8CAE3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Kcnmb1Q8CAE3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Kcnmb1Q8CAE3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Kcnmb1Q8CAE3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Kcnmb1Q8CAE3 Amer2-203ENSMUST00000225247 2662 ntBASIC23.08■■□□□ 1.29
Kcnmb1Q8CAE3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
Kcnmb1Q8CAE3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Kcnmb1Q8CAE3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Kcnmb1Q8CAE3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Kcnmb1Q8CAE3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Kcnmb1Q8CAE3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.04■■□□□ 1.28
Kcnmb1Q8CAE3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Kcnmb1Q8CAE3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Kcnmb1Q8CAE3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Kcnmb1Q8CAE3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Kcnmb1Q8CAE3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.02■■□□□ 1.28
Kcnmb1Q8CAE3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Kcnmb1Q8CAE3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Kcnmb1Q8CAE3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Kcnmb1Q8CAE3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.01■■□□□ 1.27
Kcnmb1Q8CAE3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23■■□□□ 1.27
Kcnmb1Q8CAE3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Kcnmb1Q8CAE3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Kcnmb1Q8CAE3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Kcnmb1Q8CAE3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Kcnmb1Q8CAE3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Kcnmb1Q8CAE3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Kcnmb1Q8CAE3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Kcnmb1Q8CAE3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Kcnmb1Q8CAE3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.96■■□□□ 1.27
Kcnmb1Q8CAE3 Gm24804-201ENSMUST00000174982 85 ntBASIC22.95■■□□□ 1.26
Kcnmb1Q8CAE3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Kcnmb1Q8CAE3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Kcnmb1Q8CAE3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Kcnmb1Q8CAE3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Kcnmb1Q8CAE3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Kcnmb1Q8CAE3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Kcnmb1Q8CAE3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Kcnmb1Q8CAE3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.9■■□□□ 1.26
Kcnmb1Q8CAE3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Kcnmb1Q8CAE3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Kcnmb1Q8CAE3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.89■■□□□ 1.25
Kcnmb1Q8CAE3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Kcnmb1Q8CAE3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Kcnmb1Q8CAE3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Kcnmb1Q8CAE3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Kcnmb1Q8CAE3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Kcnmb1Q8CAE3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Kcnmb1Q8CAE3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.86■■□□□ 1.25
Kcnmb1Q8CAE3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Kcnmb1Q8CAE3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Kcnmb1Q8CAE3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
Kcnmb1Q8CAE3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms